| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0388 |
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| Symbol | rbsA5 |
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| ID | 5711298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 369763 |
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| End bp | 370548 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266287 |
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| Product | ribose import ATP-binding protein rbsA |
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| Protein accession | YP_001531738 |
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| Protein GI | 159042944 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.956313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACA CATCGCAACA ACCGATCCTC GCCGGTCGCA ACCTGGTCAA ACGCTACGGC
CGCGTCACCG CACTCGATCA TTGCGACTTC GAGCTCTACC CGGGCGAGAT CCTCGCGGTG
ATCGGCGATA ACGGGGCGGG CAAGTCGTCG CTGATCAAGG CGGTCTCCGG CGCGGTCATC
CCCGACGAGG GCGAGGTCTT CCTCGAAGGC AAACGGGTCA GGTTCCAAAG CCCGCTCGAC
GCCCGCGCCG CCGGGATCGA AACCGTCTAC CAACAACTCG CCATGTCCCC TGCACTCAGC
ATCGCCGACA ACATGTTCAT GGGGCGCGAG CTGCGCAAAC CCGGGTGGCG GGGCAAATGG
CTGCGCCAGC TCGACCGCGC CGCGATGGAG AAATTCGCCC GCGACAAGTT GAGCGAGCTG
GGCCTGATGA CCATCCAGAA CATCAACCAG GCGGTCGAAA CCCTCTCGGG CGGCCAGCGC
CAGGGCGTCG CCGTGGCCCG GGCGGCGGCC TTCGGCTCCA AGGTGATCAT CCTCGACGAG
CCGACCGCGG CCCTGGGCGT GAAGGAAAGC CGCCGGGTGC TGGAGCTGAT CCTCGACGTG
CGCGCCCGCG GCATCCCGAT CGTGCTGATC AGCCACAACA TGCCCCATGT GTTCGAAGTG
GCCGACCGCA TCCATATCCA CCGGCTGGGC AAACGGCTCT GCGTGATCGA CCCCAAAGAC
CACGACATGT CCGACGCGGT GGCCTTCATG ACCGGCGCGA AAGAGCCCGA GAGCGCCGCG
GCCTGA
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| Protein sequence | MTDTSQQPIL AGRNLVKRYG RVTALDHCDF ELYPGEILAV IGDNGAGKSS LIKAVSGAVI
PDEGEVFLEG KRVRFQSPLD ARAAGIETVY QQLAMSPALS IADNMFMGRE LRKPGWRGKW
LRQLDRAAME KFARDKLSEL GLMTIQNINQ AVETLSGGQR QGVAVARAAA FGSKVIILDE
PTAALGVKES RRVLELILDV RARGIPIVLI SHNMPHVFEV ADRIHIHRLG KRLCVIDPKD
HDMSDAVAFM TGAKEPESAA A
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