| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0365 |
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| Symbol | chrR1 |
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| ID | 5711274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 349194 |
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| End bp | 349865 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266263 |
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| Product | anti-ECFsigma factor |
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| Protein accession | YP_001531715 |
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| Protein GI | 159042921 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.931641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGGTA TCAAGCACCA CCTGAACGAC GCACTCCTGA TGGCGTATTC CGCGGGCACC
TTGCCCGAGG CGTTCAGCCT CGTGGTCGCA ACCCATATCT CCATGTGCGA TGACTGCCGC
GCCGCCCTGG CCGCCCATGA CGCGGTCGGC GGGGCGCTGC TCGAGGATAC CGCCGAGGTC
GAGCTGGCGC CCGAGGCGCT GGACAAATGC CTTGCCGCGA TCCAGGCGCT GCCGCCCAAA
GGGCCGATCA AGCTGCCCAA ATCCATGACA AACGGGTCCG CGCCGCGCAG CTCCGTCTTC
CCCAGCCCGC TTGCGGAATA CGTGAAGGGC GATGTGGAGG ATGTGAATTG GCGCTCTGTG
GGTCTCGGGG TGCGACAGGC GATCCTGCCG ACCTCCAAGG AAGCGTCCGT GCGGCTGCTC
TATATCCCGG CCGGGGCCGA AGTGCCCGAT CACGGCCATC ACGGGACCGA GCTGACCCTG
GTGCTGCAAG GGGCCTTCCG GGACGAATTC GACCGGTTCG GCCCGGGCGA CATCGAGGTG
GCCGACCCGA ATGTGGAACA CACCCCGGTG GCCGAAGCGG GGGAGGCCTG CATCTGCCTC
GCCGCGACCG ACGCGCCGCT GAAATTCCGC AGCATCCTGC CGAAAATCGC GCAGCCCTTC
CTGCGCATCT GA
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| Protein sequence | MTGIKHHLND ALLMAYSAGT LPEAFSLVVA THISMCDDCR AALAAHDAVG GALLEDTAEV
ELAPEALDKC LAAIQALPPK GPIKLPKSMT NGSAPRSSVF PSPLAEYVKG DVEDVNWRSV
GLGVRQAILP TSKEASVRLL YIPAGAEVPD HGHHGTELTL VLQGAFRDEF DRFGPGDIEV
ADPNVEHTPV AEAGEACICL AATDAPLKFR SILPKIAQPF LRI
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