Gene Dshi_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0347 
SymbolbluB 
ID5711256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand- 
Start bp332537 
End bp333166 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content71% 
IMG OID641266245 
Productcob(II)yrinic acid a,c-diamide reductase 
Protein accessionYP_001531697 
Protein GI159042903 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID[TIGR02476] cob(II)yrinic acid a,c-diamide reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.218342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGCT TCACGCCCGC GTTCCGCGCG GAACTGACGG AATTGATGCG GTGGCGGCGC 
GATGTGCGCC GCTTCCGCAC CGATCCGGTG CCCGACGCGG TGCTCGCGCG CTGCCTCGAC 
AGCCTGCGCC TGGCCCCCTC GGTGGGCCTG TCCGAGCCGT GGCGCGTGCT GCGGATCGAC 
AGCCCCGCGG CCCGCGCCGC GGCGGCGGCG AATTTCGCCG AGACCAACGC GGATGCCCTT 
GCAGGGCAGC CGGGCGACAA GGCCGCGGAT TACGCGCGGT TGAAACTGTC GGGCATGGAC 
GCCGCCCCGA TACAGCTGGC GATCTATTGC GACACGGATC CGGCCAAGGG GTCGGGTCTG 
GGCGCGGCGA GCATGCCGCA AATGCGCCAG TACTCGGTCG TGTCGGGGGT CACCATGATG 
TGGCTGACCG CGCGGGCCGA GGGGCTGGGG CTCGGCTGGG TCTCCATTCT GGACCCGGAC 
CGGCTGGCAC GGGACCTCGC GGTCCCGGCC ACATGGGACC TGATCGGTTA CTTCTGCCTC 
GGCTGGCCCG AGGACGAGGC CGACACCCCG GAATTGAAGC GTCTGGGTTG GGAAGCCCGG 
GCGGAGGCAT TGGAACTGGA GGTCCGCTGA
 
Protein sequence
MRSFTPAFRA ELTELMRWRR DVRRFRTDPV PDAVLARCLD SLRLAPSVGL SEPWRVLRID 
SPAARAAAAA NFAETNADAL AGQPGDKAAD YARLKLSGMD AAPIQLAIYC DTDPAKGSGL 
GAASMPQMRQ YSVVSGVTMM WLTARAEGLG LGWVSILDPD RLARDLAVPA TWDLIGYFCL 
GWPEDEADTP ELKRLGWEAR AEALELEVR