| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0313 |
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| Symbol | |
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| ID | 5711563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 301799 |
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| End bp | 303109 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641266209 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_001531663 |
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| Protein GI | 159042869 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.379077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATC TGTTCGACCG CGACGGGGCC GCGCCGCCCG ATGACGGGCC CCGGCCCCTG
GCGGACCGGC TGCGGCCCGC GCATCTGTCC GAGGTGATCG GGCAGGACCA CCTTCTGGGC
CCGGACGGGC CGCTCGGGGC CATGCTGGCC AATCGTGCGC TGTCTTCAGT GATCTTCTGG
GGGCCGCCCG GGGTGGGCAA GACCACCATC GCGCGGCTGC TGGCTGCGGA AACCGACCTT
GCCTTCGTTC AGATCAGCGC GATTTTCACC GGGGTGCCGG ACCTGCGCAA GGTGTTCGAG
GCCGCGCGGC TGCGGCGGCA GGGCGGGCAG GGGACGCTTC TGTTCGTGGA CGAGATCCAC
CGGTTCAACA AGGCGCAGCA GGACGGCTTC CTGCCCCATA TGGAGGACGG GACCATCGTT
CTGGTGGGCG CCACCACGGA AAACCCGTCC TTCGAGTTGA ACGCGGCGGT CCTGAGCCGG
GCACAGGTTC TGGTGCTGCA CCGTCTGGAC GCGGCGGCGC TGGAGGCGCT GTTGGCGCGG
GCGGAGGCGC TGCTGGGCGT GAGCCTGCCG CTGGAGCCCG GGGCGCGGGC GGCGCTGATC
GAGATGGCGG ATGGGGATGG GCGGGCGCTC TTGAACCTGA TCGAGCAGGT CGCGAGCTGG
ACGCCCGAAG CGCCGCTCGA TGCCAAGGCG CTCGGGCAGC GGCTGAGCCA GCGGGCGGCG
CAATACGACA AGTCGGGCGA CGGGCATTAC AACCTGATCT CGGCGCTGCA CAAATCGGTG
CGGGGATCGG ACCCGGATGC GGCGCTCTAC TGGCTGGCGC GGATGCTGAC GGCCGGGGAG
GACCCGAGGT ACCTGATGCG GCGGATCACG CGGATGAGCG TGGAGGATAT CGGGCTGGCC
GACCCGCAGG CGCAGCGGCT GTGCCTGGAT GCGTGGCAGA CCTATGAGCG GCTGGGCAGT
CCCGAAGGTG AGCTGGCGAT CGCGCAGGCG GTGGTGTACC TGGCGCTCGC GCCCAAGTCG
AACGCGGCCT ATGTCGCCTA CAAGGCGGCG ATGAAGCAGG CGAAATCCAG CGGCTCGGCC
CCGCCGCCCA AGCACATCCT GAACGCGCCC ACGGCCCTGA TGAAGGATCA GGGGTACGGC
GCGGACTATG CCTATGACCA CGAGGCGGAG GATGGGTTTT CGGGGCAGAA CTATTTTCCC
GACGACATGG CGCGGCCGCG TTATTACGCG CCGGTGGAGC GCGGGTTCGA GCGCGAGCTG
GCCAAGCGGC TGGCCTATTT CGCCAAGCTG CGCGCCAAGA GGCAGAGTTG A
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| Protein sequence | MADLFDRDGA APPDDGPRPL ADRLRPAHLS EVIGQDHLLG PDGPLGAMLA NRALSSVIFW
GPPGVGKTTI ARLLAAETDL AFVQISAIFT GVPDLRKVFE AARLRRQGGQ GTLLFVDEIH
RFNKAQQDGF LPHMEDGTIV LVGATTENPS FELNAAVLSR AQVLVLHRLD AAALEALLAR
AEALLGVSLP LEPGARAALI EMADGDGRAL LNLIEQVASW TPEAPLDAKA LGQRLSQRAA
QYDKSGDGHY NLISALHKSV RGSDPDAALY WLARMLTAGE DPRYLMRRIT RMSVEDIGLA
DPQAQRLCLD AWQTYERLGS PEGELAIAQA VVYLALAPKS NAAYVAYKAA MKQAKSSGSA
PPPKHILNAP TALMKDQGYG ADYAYDHEAE DGFSGQNYFP DDMARPRYYA PVERGFEREL
AKRLAYFAKL RAKRQS
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