| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0251 |
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| Symbol | |
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| ID | 5712177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 249241 |
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| End bp | 250392 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641266147 |
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| Product | efflux transporter |
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| Protein accession | YP_001531601 |
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| Protein GI | 159042807 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAGG ATCCCGCCAG CCCCCTCAGC CCGTCCCGGA CCCGGCGGGG TCTGCGGCGC
CTCGGCATCC TCACCGGCAC CGGCCTGACC CTCGCACTGG CCGCCGGGCT GGTGATGGGC
GGCAGCGGCC TGATCGCCGC CCGCGCGCAG CAGGACGGGC CCGCCCGCCC CGAAACGGTG
CTGCCGGTGC AGACAGCCCC CCTCGTGATC GAGGACAGCT ACGCGGTCAC CGCGCGCTTC
ACCGGCCAGG TCGAACCGGC CCGCAGCGCC GATCTGGGGT TCGAGGCGGG CGGCACCCTG
GCCGAAGTGC TGGTGGACGA AGGCGACCGG GTGGCGGCGG GCGACGTGCT CGCCCGGCTC
GATATCCGCG CCCAGCAGGC CGACCGTGCC GCCCAGGTCG CCGCCCGTGA CGCCGCCCGC
GCCCGGCGCG ACCTGGCCGA GTTGACCTCC GCGCGCCAGG AGCGCCTCGC CGCCTCGGAC
TTCGCCTCCG CCCAGCGCGC CGACGAAGCA CGGTTCCGTC TGGCCGAGGC GGAGGCGCAG
ATCGCCCAGG CCGACGCCGC CATCCTCGCC CTCGACGTGG CCCTGTCGAA ATCCCAGATC
ACCGCACCCT TCGACGGCAC CATCGCCGCG CGGCTGCGCG ACGAAGGCGC ACGGCTCGGC
GGCGGCACCC CAGTCCTGCG GATCGAGGAG ACCGAAGCCC CGCAGCTGCG CGTGGGCCTG
CCCGACGCGC TGGCGCAGAC CCTCGGCCCC GACGCCACCT TCCCGGTGAC CCTGCCGGGC
GGGACGGCCA CCGCCACGCT CGACCGGCTG CGCCCGGACC TCGACCCGGT CACCCGGACC
CGTGCGGCGG TCTTCACCCT CGACCGCCCC GCACCGTCGG GCACGCTCGC CACGCTGGAG
ATGACCCGCG AGGTGCCGGG CCGCGGCGCC TGGGTGCCGC TCTCGGCCCT TTCCGAAGGC
ATCCAGGGGC TCTGGACGCT CTACCTGCTC GATGACGGCG ACATCCTGCG CCGCGAATCG
GTCGAGGTGC TGCACGCCAC GGGCACCCGC GCCTTCGTCA CCGGCACCTT TCCGCAGGCC
GCGCGCTACG TTCCCGCCGG CGCCCACCGG ATCGCGCCGG GCCAGCGCGT CGCGCCCACG
CCCGCGGGCT GA
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| Protein sequence | MPKDPASPLS PSRTRRGLRR LGILTGTGLT LALAAGLVMG GSGLIAARAQ QDGPARPETV
LPVQTAPLVI EDSYAVTARF TGQVEPARSA DLGFEAGGTL AEVLVDEGDR VAAGDVLARL
DIRAQQADRA AQVAARDAAR ARRDLAELTS ARQERLAASD FASAQRADEA RFRLAEAEAQ
IAQADAAILA LDVALSKSQI TAPFDGTIAA RLRDEGARLG GGTPVLRIEE TEAPQLRVGL
PDALAQTLGP DATFPVTLPG GTATATLDRL RPDLDPVTRT RAAVFTLDRP APSGTLATLE
MTREVPGRGA WVPLSALSEG IQGLWTLYLL DDGDILRRES VEVLHATGTR AFVTGTFPQA
ARYVPAGAHR IAPGQRVAPT PAG
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