Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0243 |
Symbol | |
ID | 5712169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 240789 |
End bp | 241940 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641266139 |
Product | acyltransferase family protein |
Protein accession | YP_001531593 |
Protein GI | 159042799 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.473952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCG CGCGCCCCAT GTCGCCGGGC TTCTCGCTCT GGCTCGATGT GCTGCGGGCG GGCGCGGCGC TGACGGTGCT CTTCGGGCAC ATGGCCCATA CCCGTTTCAC CCGGGGCGAC TACGAGGTGC TGCGCGACTG GAACCTGGCC AGCGACGCGG TGGTGGTGTT TTTCGTGCTG TCGGGCGTGG TGATCGCCTA TGCAGCGGAA CGCGACGGCA CCCTCGGCCG CTTCGCCTTT CACCGGCTGA CCCGGGTGCT GTCGGTGGTG GCCCCCGCGC TCGTGCTGAC CCTGCTGTTC GACGCCATCG GCCAACGGCT CGACCTGCGC GCCTACCAGC CCCCGTTCTT CGAGGCCCTG CCGGTGGCCG AGATGCTCTG GCGCGGGCTC AGCTTCAGCA ACGAATGGCA GGGGCTGTCG GACCGGGTGC GCCTGGGCTC CAACGGGCCG CTCTGGTCGC TGAGCTACGA GGTCGCCTTC TACGCCCTCT TCGCCATCGC CTTCTATCTG CGCGGGTTCT TGCGCTGGGT GCTCCTCGCG CTGGGCGCGC TCCTCGCGGG GTTGCCGATC CTGGCACTCA TGCCCTGCTG GCTTCTGGGC GTCGCGCTCT GGCACCATAT CCAACGCGCC CTGGCGCTGC CCCGGTCCCG CGCCTGGGCC CTCGCCCTCG GCGGCCCTGT CACCCTCGTT GCGCTCAAGG CCGCAGGTCT GGCCCCGTTT CTCAGCGCGC TCACCGCCGC GGCGGTCGCC CCCGCCAGTC ACCACGCCCT GCTCGGCTAT TCCGACGAGG TGCTGTGGAA CACGTTGCTC GCGCTCTGCG TCGCCGCCCA CCTGCGCGGG GTCCATGCCC TCTGCGTCGG CCGCACCGCA CCGCACCGGG GCCGCCCCGC TCGCGCCGTG CGCTGGATCG CGCAGGGCAG CTTTTCGCTC TATGTCCTCC ACTACCCGGT ACTGCACCTG CTGGATGCGG GCCTGCCCGA GGCGCTGCCG GGCTACGATT TGTGGCTGCT GGCCCTGACG CTCTTGGCCT GCTTCGCCTT CGCCGCTCTG TTCGAGCGTC GCCTGCCGCA GCAGCGCGCC CGCCTGCGGC AGCTCTGGTG CAGATTGCAC AAGCCTCGCT CGGATCGCCC GGAACGCGCC TTGTCGGGAT AA
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Protein sequence | MSGARPMSPG FSLWLDVLRA GAALTVLFGH MAHTRFTRGD YEVLRDWNLA SDAVVVFFVL SGVVIAYAAE RDGTLGRFAF HRLTRVLSVV APALVLTLLF DAIGQRLDLR AYQPPFFEAL PVAEMLWRGL SFSNEWQGLS DRVRLGSNGP LWSLSYEVAF YALFAIAFYL RGFLRWVLLA LGALLAGLPI LALMPCWLLG VALWHHIQRA LALPRSRAWA LALGGPVTLV ALKAAGLAPF LSALTAAAVA PASHHALLGY SDEVLWNTLL ALCVAAHLRG VHALCVGRTA PHRGRPARAV RWIAQGSFSL YVLHYPVLHL LDAGLPEALP GYDLWLLALT LLACFAFAAL FERRLPQQRA RLRQLWCRLH KPRSDRPERA LSG
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