Gene Dshi_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0243 
Symbol 
ID5712169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp240789 
End bp241940 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content71% 
IMG OID641266139 
Productacyltransferase family protein 
Protein accessionYP_001531593 
Protein GI159042799 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.473952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG CGCGCCCCAT GTCGCCGGGC TTCTCGCTCT GGCTCGATGT GCTGCGGGCG 
GGCGCGGCGC TGACGGTGCT CTTCGGGCAC ATGGCCCATA CCCGTTTCAC CCGGGGCGAC
TACGAGGTGC TGCGCGACTG GAACCTGGCC AGCGACGCGG TGGTGGTGTT TTTCGTGCTG
TCGGGCGTGG TGATCGCCTA TGCAGCGGAA CGCGACGGCA CCCTCGGCCG CTTCGCCTTT
CACCGGCTGA CCCGGGTGCT GTCGGTGGTG GCCCCCGCGC TCGTGCTGAC CCTGCTGTTC
GACGCCATCG GCCAACGGCT CGACCTGCGC GCCTACCAGC CCCCGTTCTT CGAGGCCCTG
CCGGTGGCCG AGATGCTCTG GCGCGGGCTC AGCTTCAGCA ACGAATGGCA GGGGCTGTCG
GACCGGGTGC GCCTGGGCTC CAACGGGCCG CTCTGGTCGC TGAGCTACGA GGTCGCCTTC
TACGCCCTCT TCGCCATCGC CTTCTATCTG CGCGGGTTCT TGCGCTGGGT GCTCCTCGCG
CTGGGCGCGC TCCTCGCGGG GTTGCCGATC CTGGCACTCA TGCCCTGCTG GCTTCTGGGC
GTCGCGCTCT GGCACCATAT CCAACGCGCC CTGGCGCTGC CCCGGTCCCG CGCCTGGGCC
CTCGCCCTCG GCGGCCCTGT CACCCTCGTT GCGCTCAAGG CCGCAGGTCT GGCCCCGTTT
CTCAGCGCGC TCACCGCCGC GGCGGTCGCC CCCGCCAGTC ACCACGCCCT GCTCGGCTAT
TCCGACGAGG TGCTGTGGAA CACGTTGCTC GCGCTCTGCG TCGCCGCCCA CCTGCGCGGG
GTCCATGCCC TCTGCGTCGG CCGCACCGCA CCGCACCGGG GCCGCCCCGC TCGCGCCGTG
CGCTGGATCG CGCAGGGCAG CTTTTCGCTC TATGTCCTCC ACTACCCGGT ACTGCACCTG
CTGGATGCGG GCCTGCCCGA GGCGCTGCCG GGCTACGATT TGTGGCTGCT GGCCCTGACG
CTCTTGGCCT GCTTCGCCTT CGCCGCTCTG TTCGAGCGTC GCCTGCCGCA GCAGCGCGCC
CGCCTGCGGC AGCTCTGGTG CAGATTGCAC AAGCCTCGCT CGGATCGCCC GGAACGCGCC
TTGTCGGGAT AA
 
Protein sequence
MSGARPMSPG FSLWLDVLRA GAALTVLFGH MAHTRFTRGD YEVLRDWNLA SDAVVVFFVL 
SGVVIAYAAE RDGTLGRFAF HRLTRVLSVV APALVLTLLF DAIGQRLDLR AYQPPFFEAL
PVAEMLWRGL SFSNEWQGLS DRVRLGSNGP LWSLSYEVAF YALFAIAFYL RGFLRWVLLA
LGALLAGLPI LALMPCWLLG VALWHHIQRA LALPRSRAWA LALGGPVTLV ALKAAGLAPF
LSALTAAAVA PASHHALLGY SDEVLWNTLL ALCVAAHLRG VHALCVGRTA PHRGRPARAV
RWIAQGSFSL YVLHYPVLHL LDAGLPEALP GYDLWLLALT LLACFAFAAL FERRLPQQRA
RLRQLWCRLH KPRSDRPERA LSG