Gene Dshi_0209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0209 
Symbol 
ID5712134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp206303 
End bp207205 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content66% 
IMG OID641266104 
Producthypothetical protein 
Protein accessionYP_001531559 
Protein GI159042765 
COG category[R] General function prediction only 
COG ID[COG1660] Predicted P-loop-containing kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.77608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CAGCGCCAAC GCCCGAAAAG ATGCCGCAGA AGATCGTGCT GGTCACCGGG 
CCGTCCGGCG CCGGCCGGAC CACGGCCATC CGCGCCCTCG AAGATCTCGG CTTTGAGGCC
ATCGACAACA TGCCGATCTC GCTGGTTCCC CGGCTGCTGG ACGGCCCGCC GTTGGCGCGC
CCGCTGGCGC TCGGGCTGGA TGCCCGCACG CGGGATTTCA GCGTGACCGC GGTCGCGGAC
CTGTTGCACC TGCTCGCCGA GGATCCAAGG GCCGATGCGC AACTGCTGTT TCTCGATGCC
TCCCCCCGGG TTCTGACGCG CCGGTTCTCC GAGACCCGCC GCCGCCATCC CCTCGCGCCG
CTCGAAAGCC CGATGGACGG CATCGCGCGG GAGACCGATC TGCTCGCCCC GATCCGGGCG
CGGGCCGACG TGGTGATCGA CACCTCCGAG CTGTCCCCCC ACGACCTGCG GGCCGAAATG
CTGCGCTGGT TCGGCGACCG CGACAGTTTG CGCCTGGCGA TCACGGTCCA ATCCTTTTCC
TACAAACGCG GCGTGCCCCA GGGCACGGAC ATGGTGTTCG ACGTCCGCTT CCTGCGAAAC
CCGTATTGGG AGGACACCCT ACGCCGCCTG GACGGACGCG ACGCCCGGGT GCAGGACTAT
GTGTCCGCGG ATCCGCGTTT CGACAGTTTC TTTGACAATA TCGCCTCGCT CGTTCGATTG
TTGCTGCCCG CCTACCGCGA AGAGGGAAAA TCGCACCTCT CCATTGGCTT CGGTTGCACC
GGCGGGCAAC ATCGCAGCGT CACCGTCGCA GAAAAGCTCT CCGCGGCTCT TGTCGCCGAG
GGGTGGCAGG TATCTAACAG ACACTTGGAA CTGTCGCGCC GATCCATCGG GGCGCAGTCC
TGA
 
Protein sequence
MTDTAPTPEK MPQKIVLVTG PSGAGRTTAI RALEDLGFEA IDNMPISLVP RLLDGPPLAR 
PLALGLDART RDFSVTAVAD LLHLLAEDPR ADAQLLFLDA SPRVLTRRFS ETRRRHPLAP
LESPMDGIAR ETDLLAPIRA RADVVIDTSE LSPHDLRAEM LRWFGDRDSL RLAITVQSFS
YKRGVPQGTD MVFDVRFLRN PYWEDTLRRL DGRDARVQDY VSADPRFDSF FDNIASLVRL
LLPAYREEGK SHLSIGFGCT GGQHRSVTVA EKLSAALVAE GWQVSNRHLE LSRRSIGAQS