| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0205 |
|---|
| Symbol | |
|---|
| ID | 5712130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 203871 |
|---|
| End bp | 204635 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641266100 |
|---|
| Product | protein of unknown function DUF81 |
|---|
| Protein accession | YP_001531555 |
|---|
| Protein GI | 159042761 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.670843 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGT TTCTGTCCCT GTCCGAGCTG ACGCTCGCGT TTCTGGTGCT TTGTGCGGTC
TTTGCCGGTG TGGTGAAGGG GGCGGTGGGG TTCGCGATGC CGCTGATCCT GATGTCCGGG
CTGTCGGCGG TGGTGCCGGT GCCGGTGGCG CTGGCCGGTT TGATGGTGCC GTCGCTGGTG
ATGAACCTGT GGCAGGCGCT GCGCGGCGGG GTGGGCGCCC TGTCGCTGAC GGCGCGGACG
CATTGGCGGC TGGTGGCGCT GGTTCTGGTG TTCATCGCGC TTTCGGGACA GTTGGTGCTG
GCTGTGCCGG AGCGGATCTT GTCGCTGATG ATCGGGGTCC CGATCGCGCT TTATGCCACG
AGCCAACTTC TGGGCTGGCG GTTGCGCATC GCGCCTGCCT ATCGGCGGCG GGCCGAATTG
GGGACGGGCG TGATAGCCGG TTTTTTCGGC GGGTTCTCGG GGATTTGGGG TCCGCCCATC
GTGGCCTATC TCGTGGCGCT GGATACGCCC AAGGCCGAGC AGGTGCGGAC GCAGGGGCTT
CTGTACGGTC TGGCGAGTTG CGCGCTGGTG CTGACGCATT TGCGGACCGG GGTGGCCAAT
GTGGAAACCC TGACCTTTTC GGCGATGCTT CTGGTGCCGG CGGCGGCGGG CATGGCGATG
GGATTGTGGT TGCAGGACCG GATGGATCAG GATCGGTTCC GGCAGGCGAC GCTGGTCTTC
CTGCTTCTGG CAGGTCTGAA CCTGGTGCGG CGCGGGATTA TGTGA
|
|---|
| Protein sequence | MDLFLSLSEL TLAFLVLCAV FAGVVKGAVG FAMPLILMSG LSAVVPVPVA LAGLMVPSLV
MNLWQALRGG VGALSLTART HWRLVALVLV FIALSGQLVL AVPERILSLM IGVPIALYAT
SQLLGWRLRI APAYRRRAEL GTGVIAGFFG GFSGIWGPPI VAYLVALDTP KAEQVRTQGL
LYGLASCALV LTHLRTGVAN VETLTFSAML LVPAAAGMAM GLWLQDRMDQ DRFRQATLVF
LLLAGLNLVR RGIM
|
|---|
| |