| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0180 |
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| Symbol | def2 |
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| ID | 5712105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 183683 |
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| End bp | 184189 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266075 |
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| Product | peptide deformylase |
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| Protein accession | YP_001531530 |
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| Protein GI | 159042736 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.155528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGAC CCTTCCTCTC CTGGCCCGAT GCGCGGCTGC GGACCCCCGC CGCCCCGGTG
GCCGAGATCA CCGACGAGAT CCGCACCGTC TGGGACGACA TGATCGACAC GATGGAGGCG
ATGCCGGGGA TGGGGCCGGG CGCGGGGCTG GCCGCCCCGC AGATCGGCGT GATGCAGGCG
CTGGCGGTGG TCGATGCCTC CGAGGAGCGG GGCCGGGCGA TCCGGATGGC GAATCCGCAA
GTGCTCCATG CCAGCGCACA GCTGCGCAGC CATGAGGAGG CGTCGCCGAA CCTGCCTGGC
GTCTTTGCGA AGATCGACCG GCCGCGGGCG GTGACGGTGC GGTTCCTGGA TGCAAATGGC
GCGGTTAAGG AGCAGGATTT CGTCGGGCTC TGGGCCACCA GCGTGCAGCA CCAGATCGAT
CACCTGGCGG GGCGGATGTA TTTCGACCGG CTGAGCAAGA CGAAACGCGA CATGCTGCTG
CGCAAGGCAA GGAAGCTGGC AAGATGA
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| Protein sequence | MIRPFLSWPD ARLRTPAAPV AEITDEIRTV WDDMIDTMEA MPGMGPGAGL AAPQIGVMQA
LAVVDASEER GRAIRMANPQ VLHASAQLRS HEEASPNLPG VFAKIDRPRA VTVRFLDANG
AVKEQDFVGL WATSVQHQID HLAGRMYFDR LSKTKRDMLL RKARKLAR
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