| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0155 |
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| Symbol | lrgA |
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| ID | 5711623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 155531 |
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| End bp | 155887 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266050 |
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| Product | putative LrgA family protein |
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| Protein accession | YP_001531505 |
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| Protein GI | 159042711 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCTGC ACCTGCTTGT CCTGCTCGTC TTCCAGCTGA TCGGCGAGGT CCTTGCCCGC
TCCCTGGGCC TGCTGGTGCC GGGGCCGGTC CTGGGATTGG TGCTTCTGCT CGGGTTCTTC
CTTGTGCTGC CCCAGGTGGC GGAGGCGGTG CGGCCCACGG CCAACGCGCT GCTGGCGCAT
CTGTCGCTCT TGTTCGTGCC TGCCGGGGTC GGGGTGGTGG CGCATCTCGA TGTGCTGGGG
GAAAACGGTG TGCCGCTGCT CATCGCTCTG GTGATCAGCA CCCTTGTGGC GATCAGCGTG
GGGGCGCTGG TCTTCGTCGG TGTCGCGCGA CTGATCGGGG ATGCGGGCGA TGACTGA
|
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| Protein sequence | MILHLLVLLV FQLIGEVLAR SLGLLVPGPV LGLVLLLGFF LVLPQVAEAV RPTANALLAH
LSLLFVPAGV GVVAHLDVLG ENGVPLLIAL VISTLVAISV GALVFVGVAR LIGDAGDD
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