| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0141 |
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| Symbol | ttg2D |
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| ID | 5711609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 139909 |
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| End bp | 140529 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641266036 |
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| Product | toluene tolerance family protein |
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| Protein accession | YP_001531491 |
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| Protein GI | 159042697 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.906707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGAGTA ACCTTTCCCG CCGCCGCGTG CTCCGCACTC TGGGTGCCTT CGCCCTGAGC
CTGCCCTTTG CCGGACTGCT CGGACCACGG CCCGTCCAGG CCCTCAACAC CAACGAGGCC
AAGGATCTTG TCGGGCGGCT CGTGGGCGAG ATCGACGCGG CGATCAACTC GGGCAAGACC
GGCTCGGCCC TCTATCGCGA GTTCGAACGC ATCTTCGAGC GCTACGCGGA TGTGGACATC
ATCGCGCAAT CGGTTCTCGG CGTGGAATGG CGCTCGGCCT CCAACGCCCA GCGGCGTGCC
TACACGGACG CGTTCAAGAC CTATATCTCG CGCAAATACG GACGTCGTTT CCAGGAGTTC
GTCGGCGGCC GGATCGAGGT GAACAGTGCA CGTCCCGTGC GCAGCTTCTT CGAGGTGAAA
TCGACCGCGT TCCTGCGGGG CGAGGCCCCG TTCGAAGTGA TTTTCCTGGT GTCCGACCGT
TCGGGGCGCG ACCTGTTCTT CAACATCGTC ATCGAAGGCG TGAACCTCGC GATCACGGAG
CGGACCGAGA TCGGCGCGCT GCTGGACCGC AACGGGGGCA ATCTCGACGC GATGATCCAG
GCGTTGCGCA ATACAACCTG A
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| Protein sequence | MSSNLSRRRV LRTLGAFALS LPFAGLLGPR PVQALNTNEA KDLVGRLVGE IDAAINSGKT
GSALYREFER IFERYADVDI IAQSVLGVEW RSASNAQRRA YTDAFKTYIS RKYGRRFQEF
VGGRIEVNSA RPVRSFFEVK STAFLRGEAP FEVIFLVSDR SGRDLFFNIV IEGVNLAITE
RTEIGALLDR NGGNLDAMIQ ALRNTT
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