| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0133 |
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| Symbol | |
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| ID | 5711601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 132102 |
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| End bp | 133061 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266028 |
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| Product | putative type I secretion target repeat protein |
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| Protein accession | YP_001531483 |
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| Protein GI | 159042689 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.749153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGAAGT CTGACGGAGA TCACACCTAT ACAAGCCTGG GCTGGCCGAA CGACGCCTAC
TATTTGGCCG AGGGCACGGA GCTGAACGTC ATGAAGATGT CCCTCGTCGA CAAGGACGAG
GACGGCGATA TCGGCCCCGG CGACATGATC AACGGCCTGG AAGTCACAGA CTCGTATCTC
GGCGACTGGA TCGGCTTCGA CTCCGGCGAA GGCGAGCAGT GGGTCTATGG TGTGACCTTC
TACCTCGAAG ACGGGTCGCA GGTCTTCATG GCCACCGATG GCACCCAATT GCAGGATGCC
AAGTCTACGG GTTGCAAATG GGTGCTGGAG AGCACCGATG TGCCTGTCAA GCAGATCACC
GCCCCTTGTT TCGTCGCGGG AACGCGTATC CTGACCCCCG AAGGAGTCGT GCCGGTCGAA
ACCTTGCGCC CCGGGGATCT TGTGCAGACG CGGGATCACG GGGCGCAGCC CGTGCTCTGG
GTCGGGCGCA GGACCCTTCC GGGCAGCGAG GCCCTGGCGC CGATCCGCTT CTCGCCCGAC
GCGCTCGGAT CCGACCGCCC GCTCTACGTA TCCCCCCAGC ATCGGATGCT GCTGTCGGAT
CCCCGCCTCT TACTCCTCTT CGAAGAGGCT GAGGTCCTTG CCGCCGCCCT GCACCTCGTC
AATGGCCACA GCGTGGTACA GGCGCCACGC GCGCGCGTGA CCTATATCCA CCTGCTATTT
GCACGGCACG AGATCGTCTA TGCCGAGGGG ATCCCGAGCG AGAGCTTTCA TCCCGGCATG
GCCGGTCTCG CGGGCTTTGG CGATGCCGCG CGAGACGAGC TCTTGGGCTT TTTCCCGCAG
CTGGCAGACC TTGATGCCGG TTTCGGCCCC TGCGCCCGCC GCGTGTTGCG CGCCCATGAG
GCCGCGGTCG CAGCACAGCT GGTCATCGGC CGCGGCGCGC ATGCCGCGAT GGCGGCCTAG
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| Protein sequence | MAKSDGDHTY TSLGWPNDAY YLAEGTELNV MKMSLVDKDE DGDIGPGDMI NGLEVTDSYL
GDWIGFDSGE GEQWVYGVTF YLEDGSQVFM ATDGTQLQDA KSTGCKWVLE STDVPVKQIT
APCFVAGTRI LTPEGVVPVE TLRPGDLVQT RDHGAQPVLW VGRRTLPGSE ALAPIRFSPD
ALGSDRPLYV SPQHRMLLSD PRLLLLFEEA EVLAAALHLV NGHSVVQAPR ARVTYIHLLF
ARHEIVYAEG IPSESFHPGM AGLAGFGDAA RDELLGFFPQ LADLDAGFGP CARRVLRAHE
AAVAAQLVIG RGAHAAMAA
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