Gene Dshi_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0107 
Symbol 
ID5711730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp105989 
End bp106960 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content65% 
IMG OID641266002 
Productferritin-like protein 
Protein accessionYP_001531457 
Protein GI159042663 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCCGC TTTTGTCCCG CAAAAGGTTC TCCGACCTGA CCGAAGAGGA AATCCTCGCC 
CTCGCCATTT CCTCGGAAGA GGATGACGCG CGGATCTATC GCTCTTATGC GCAACGTCTG
GGCACGGAGT TCCCCGACAC CGCGGCCGTC TTCCTCGGCA TGGCGGACGA GGAAGACACC
CATCGCGCCC GCCTGATCGA GCTCTTTCGC CAGCGCTTCG GCGAGACCAT TCCGCTGATC
CGGCGCGAGC ATGTGGCGGG ATTCTATGCC CGCCGCCCTG TCTGGCTGAC GGAAAACCTC
GGTCTGGAGC GGATCCGCGA GGAAGCCGCG ATCATGGAGC GCGACGCAGG CGCGTTTTAC
CACGCCGCCG CGCAGCGCTC ACAGGATGCA GGGACGCGCA AACTGCTCGG CTGGCTCGCC
GCGGCGGAGG ATGCCCATGC CCGCAAGGCG GAGACCCTGA CCGGCAAGGT CAGTTCCGAG
GCCGCGGAGC AGGAAGAGGC AGTCGCGAAA CGCCAATTCG TCCTGACCTG GGTACAGCCC
GGCCTCGCGG GGCTGATGGA CGGGTCGGTC TCTACGCTTG CCCCGATCTT TGCCGCCGCC
TTCGCAACCG GAGACACCTG GTCGACTTTC CTCGTCGGGC TTGCTGCCAG CGTCGGCGCC
GGGATCTCCA TGGGATTCAC CGAGGCGGCT TCGGATGACG GGGCCTTGTC GGGACGCGGT
GCGCCGTGGA AAAGGGGGTT GGCCTCCGGG GTGATGACCA CACTGGGCGG CTTGGGTCAC
GCCCTGCCCT ATCTCATCCC GGATTTCTGG ACCGCAACGA CCATCGCCGT GATCGTGGTG
TTCTTCGAGC TTTGGGCGAT TGCCTGGATT CAGAAAACCT ATATGGAAAC GCCGTTCTTC
CGCGCGGCTC TCCAGGTCGT GGTGGGCGGT GCGCTCGTGT TGGCCGCCGG TATTCTGATC
GGGTCGGGTT GA
 
Protein sequence
MLPLLSRKRF SDLTEEEILA LAISSEEDDA RIYRSYAQRL GTEFPDTAAV FLGMADEEDT 
HRARLIELFR QRFGETIPLI RREHVAGFYA RRPVWLTENL GLERIREEAA IMERDAGAFY
HAAAQRSQDA GTRKLLGWLA AAEDAHARKA ETLTGKVSSE AAEQEEAVAK RQFVLTWVQP
GLAGLMDGSV STLAPIFAAA FATGDTWSTF LVGLAASVGA GISMGFTEAA SDDGALSGRG
APWKRGLASG VMTTLGGLGH ALPYLIPDFW TATTIAVIVV FFELWAIAWI QKTYMETPFF
RAALQVVVGG ALVLAAGILI GSG