| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0034 |
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| Symbol | |
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| ID | 5711656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 36904 |
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| End bp | 37551 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641265928 |
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| Product | ATP-dependent protease La (LON) domain protein |
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| Protein accession | YP_001531384 |
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| Protein GI | 159042590 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.174994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000554508 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACTTT CGGCTGCAGA CCTGCCCGAC ACCATCCCCG TCTTTCCGCT GCCCGGAGCC
CTGCTCCTGC CGCGGGCCCG GTTGCCCCTT CACATCTTCG AGCCGCGCTA CCTCGCCATG
CTCGAAGATG CGCTGAAGAC GCCCCACCGG CTGATCGGCA TGGTGCAGCC GCGCGAAGTG
CCCGGCTCCA AGGACCGCCG CCTGCACAGC ATCGGCTGCG CGGGCCGGGT CTCGGCCTTC
TCCGAGACCG AGGACGGGCG CTACATGATC ACCCTGAACG GCATGTCGCG CTTCCGCATC
ACCCGCGAGG TCAGCGGTTT CACCCCGTAT CTCAAGGCAG ACGTGACCTG GGACGATTTC
GGCCGTGACC TGGGCAAGAC CGAAGAAGAC CCGGGCTTCC AGCGCGGCGC CTTCCTCGAC
CTCTTGCGCC GGTTCTTCGA AGACCAGGAC ATGCGTACCG ACTGGGACAG CCTGTCGGAG
GCCGAGGACG AGTTGCTGAT CAACTCGCTC TCGATGCTCT GCCCCTTCGA TCCGGAGGAC
AAGCAGGCCC TGCTGGAGGC GCCCTCGCTC TCCACCCGGC GCGAAACCCT CGTCACCCTG
ATCGAGTTCG CCCTGCGCGG CGGCTCCAGC GAGGAATTGC TGCAATGA
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| Protein sequence | MKLSAADLPD TIPVFPLPGA LLLPRARLPL HIFEPRYLAM LEDALKTPHR LIGMVQPREV
PGSKDRRLHS IGCAGRVSAF SETEDGRYMI TLNGMSRFRI TREVSGFTPY LKADVTWDDF
GRDLGKTEED PGFQRGAFLD LLRRFFEDQD MRTDWDSLSE AEDELLINSL SMLCPFDPED
KQALLEAPSL STRRETLVTL IEFALRGGSS EELLQ
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