| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3223 |
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| Symbol | |
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| ID | 5696085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3862378 |
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| End bp | 3864162 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641265842 |
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| Product | histidine kinase |
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| Protein accession | YP_001531103 |
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| Protein GI | 158523233 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00047761 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGAAAAC TGTTTGACCG GGCACTGTCC GCCTATTCAT ACGCCGACAT CGACCGCCGG
CTCAAAGCCC GGTTTTTCCT GGTTTTATGC ATCGTCATTC TTGCCGCAAT CCTGGTGCTG
ACCTTTCTTG CCGGCATCAT TCAACATCTT AATGTGGGCT ATCTGGTTAA CAGCGTCATT
GTCACCCTGC TGTTAAGCAC CGCCTGTCTA CTTGTCGTCC TGCGGCTCCT GGTCCGGGGC
TATTTTCTGC TGGCCGCGCA CCTGCTGATC GTCATCATCA TGACAGCGGT CTGGATCGTG
ATGGTGGTCG ATCCAGGCGA GCCCGTGGCC CGCCTGGACT CGTTTGTTTA TATCATCAGC
CTGCTGGGGT TACTGCCTTT GGTCATTCAC CGGCGCAAGT CGGTCATTGC GCTGTATGGC
CTGATCAACC TTGTTTTTCT GTTCGGGTTT GTCTATTTCT TTCGGCCCCA ACTGGCCATA
CCCGACTATG CGGTCATGGA TTTTTTGACC GACAACGCCC TGGCGGTGAT TGTCTCCTGC
TTTGTCGCGG CCAGCGTGTT TGCCATCAAT AACGCCGCCA TTAAACGGGC AAAAGCGGAA
GTCGAAGAGC GCAAACGCGC CGAAGAGGAG AGAAGAAAGC TTGAAGCCCG GCTTTACCAG
GCCGAAAAGA TGGAGGCCAT CGGCCAGCTG GTCGGCAAGC TGGCCCACGA CTTTAACAAC
ATGCTGTCGG TTGTCATCGG CAATACCGAA CTGATCCGCA TGCAGCAGGA CATAGACGAG
AACGGCCGGG AGCAGCTGCA AACCATCCAG TACGTGGCGA CCCGTTCTTC AGACCTGATA
CGGCAGCTGC TGGCGTTTGC CCGAAAACAG ACGGTGATTC CGAAAATCAT TGATATCAAC
CAGGCCATTT CAGACATGCT GCCCATGCTG CATCAGCTTG TTGGCGCCAA TATTTCGTTA
AAATGGCTGC CGGGAGAAAC CCCCGGCCAT ATCCTGATCG ACCCCTCCCA GATGGACCAG
GTGCTGACCA ACCTGCTGGT CAATGCCAGG GACGCCGTCG GCGATACCGG AACGATCACC
ATTGAGACCC GGCGTCTGCT GCTGGACCAG CGTTATGACA TCGGCCAGGG AGAAAGCCTT
TCCGGCGCCT ATCTCCTGCT GGCTGTCAGC GACACCGGCT GCGGCATGGA CAAAGAGACC
CAGTCCCAGG TTTTTGAACC GTTTTTTTCC ACAAAAAAGG GACAGGGAAC CGGCCTGGGA
CTGGCCACGG TTTACGGCAT TGTCCGGCAG CACAGCGGTT TTATCCGGGT ATACAGCGAA
CCGGGCCAGG GCACCACTTT CAAAATCTAT TTTCCCGAAG TTGAAGGACA GACGGTTGAG
GAGGGGGTAA AGCACCCGGC CAGCTCCCTG ATACCCGGAG GCACCGAGAC TGTTTTGATG
GTGGAAGACG ACCCGGCGAT TTTAAAATTC GGCGTCACCG TGCTGGAGCA GCTCGGCTAC
AACGTACTGG CCGCCGATTC TCCGGAAAAG GCCCTGGCGC TGGCGCGGTC CGGCGGGCAC
GCCATCGACC TGCTGCTCAC CGACGTGGTC ATGCCGGAAA TGAGCGGCCA CGAACTGGCC
GGTTGCATCA GGGAAACGAT CCCTACCGTC AGGTGCCTCT ACATATCCGG CTATACGGCC
AATGCCATCA GCAACGGCGA CCTGATTGAA AACCATATCT GCTTTCTGGC CAAGCCCTTT
TCCATCCGGG AGCTGGCGGA AAAAGTCAGG GAAGCCCTGT CGTGA
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| Protein sequence | MGKLFDRALS AYSYADIDRR LKARFFLVLC IVILAAILVL TFLAGIIQHL NVGYLVNSVI
VTLLLSTACL LVVLRLLVRG YFLLAAHLLI VIIMTAVWIV MVVDPGEPVA RLDSFVYIIS
LLGLLPLVIH RRKSVIALYG LINLVFLFGF VYFFRPQLAI PDYAVMDFLT DNALAVIVSC
FVAASVFAIN NAAIKRAKAE VEERKRAEEE RRKLEARLYQ AEKMEAIGQL VGKLAHDFNN
MLSVVIGNTE LIRMQQDIDE NGREQLQTIQ YVATRSSDLI RQLLAFARKQ TVIPKIIDIN
QAISDMLPML HQLVGANISL KWLPGETPGH ILIDPSQMDQ VLTNLLVNAR DAVGDTGTIT
IETRRLLLDQ RYDIGQGESL SGAYLLLAVS DTGCGMDKET QSQVFEPFFS TKKGQGTGLG
LATVYGIVRQ HSGFIRVYSE PGQGTTFKIY FPEVEGQTVE EGVKHPASSL IPGGTETVLM
VEDDPAILKF GVTVLEQLGY NVLAADSPEK ALALARSGGH AIDLLLTDVV MPEMSGHELA
GCIRETIPTV RCLYISGYTA NAISNGDLIE NHICFLAKPF SIRELAEKVR EALS
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