Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_3223 |
Symbol | |
ID | 5696085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3862378 |
End bp | 3864162 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641265842 |
Product | histidine kinase |
Protein accession | YP_001531103 |
Protein GI | 158523233 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00047761 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGAAAAC TGTTTGACCG GGCACTGTCC GCCTATTCAT ACGCCGACAT CGACCGCCGG CTCAAAGCCC GGTTTTTCCT GGTTTTATGC ATCGTCATTC TTGCCGCAAT CCTGGTGCTG ACCTTTCTTG CCGGCATCAT TCAACATCTT AATGTGGGCT ATCTGGTTAA CAGCGTCATT GTCACCCTGC TGTTAAGCAC CGCCTGTCTA CTTGTCGTCC TGCGGCTCCT GGTCCGGGGC TATTTTCTGC TGGCCGCGCA CCTGCTGATC GTCATCATCA TGACAGCGGT CTGGATCGTG ATGGTGGTCG ATCCAGGCGA GCCCGTGGCC CGCCTGGACT CGTTTGTTTA TATCATCAGC CTGCTGGGGT TACTGCCTTT GGTCATTCAC CGGCGCAAGT CGGTCATTGC GCTGTATGGC CTGATCAACC TTGTTTTTCT GTTCGGGTTT GTCTATTTCT TTCGGCCCCA ACTGGCCATA CCCGACTATG CGGTCATGGA TTTTTTGACC GACAACGCCC TGGCGGTGAT TGTCTCCTGC TTTGTCGCGG CCAGCGTGTT TGCCATCAAT AACGCCGCCA TTAAACGGGC AAAAGCGGAA GTCGAAGAGC GCAAACGCGC CGAAGAGGAG AGAAGAAAGC TTGAAGCCCG GCTTTACCAG GCCGAAAAGA TGGAGGCCAT CGGCCAGCTG GTCGGCAAGC TGGCCCACGA CTTTAACAAC ATGCTGTCGG TTGTCATCGG CAATACCGAA CTGATCCGCA TGCAGCAGGA CATAGACGAG AACGGCCGGG AGCAGCTGCA AACCATCCAG TACGTGGCGA CCCGTTCTTC AGACCTGATA CGGCAGCTGC TGGCGTTTGC CCGAAAACAG ACGGTGATTC CGAAAATCAT TGATATCAAC CAGGCCATTT CAGACATGCT GCCCATGCTG CATCAGCTTG TTGGCGCCAA TATTTCGTTA AAATGGCTGC CGGGAGAAAC CCCCGGCCAT ATCCTGATCG ACCCCTCCCA GATGGACCAG GTGCTGACCA ACCTGCTGGT CAATGCCAGG GACGCCGTCG GCGATACCGG AACGATCACC ATTGAGACCC GGCGTCTGCT GCTGGACCAG CGTTATGACA TCGGCCAGGG AGAAAGCCTT TCCGGCGCCT ATCTCCTGCT GGCTGTCAGC GACACCGGCT GCGGCATGGA CAAAGAGACC CAGTCCCAGG TTTTTGAACC GTTTTTTTCC ACAAAAAAGG GACAGGGAAC CGGCCTGGGA CTGGCCACGG TTTACGGCAT TGTCCGGCAG CACAGCGGTT TTATCCGGGT ATACAGCGAA CCGGGCCAGG GCACCACTTT CAAAATCTAT TTTCCCGAAG TTGAAGGACA GACGGTTGAG GAGGGGGTAA AGCACCCGGC CAGCTCCCTG ATACCCGGAG GCACCGAGAC TGTTTTGATG GTGGAAGACG ACCCGGCGAT TTTAAAATTC GGCGTCACCG TGCTGGAGCA GCTCGGCTAC AACGTACTGG CCGCCGATTC TCCGGAAAAG GCCCTGGCGC TGGCGCGGTC CGGCGGGCAC GCCATCGACC TGCTGCTCAC CGACGTGGTC ATGCCGGAAA TGAGCGGCCA CGAACTGGCC GGTTGCATCA GGGAAACGAT CCCTACCGTC AGGTGCCTCT ACATATCCGG CTATACGGCC AATGCCATCA GCAACGGCGA CCTGATTGAA AACCATATCT GCTTTCTGGC CAAGCCCTTT TCCATCCGGG AGCTGGCGGA AAAAGTCAGG GAAGCCCTGT CGTGA
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Protein sequence | MGKLFDRALS AYSYADIDRR LKARFFLVLC IVILAAILVL TFLAGIIQHL NVGYLVNSVI VTLLLSTACL LVVLRLLVRG YFLLAAHLLI VIIMTAVWIV MVVDPGEPVA RLDSFVYIIS LLGLLPLVIH RRKSVIALYG LINLVFLFGF VYFFRPQLAI PDYAVMDFLT DNALAVIVSC FVAASVFAIN NAAIKRAKAE VEERKRAEEE RRKLEARLYQ AEKMEAIGQL VGKLAHDFNN MLSVVIGNTE LIRMQQDIDE NGREQLQTIQ YVATRSSDLI RQLLAFARKQ TVIPKIIDIN QAISDMLPML HQLVGANISL KWLPGETPGH ILIDPSQMDQ VLTNLLVNAR DAVGDTGTIT IETRRLLLDQ RYDIGQGESL SGAYLLLAVS DTGCGMDKET QSQVFEPFFS TKKGQGTGLG LATVYGIVRQ HSGFIRVYSE PGQGTTFKIY FPEVEGQTVE EGVKHPASSL IPGGTETVLM VEDDPAILKF GVTVLEQLGY NVLAADSPEK ALALARSGGH AIDLLLTDVV MPEMSGHELA GCIRETIPTV RCLYISGYTA NAISNGDLIE NHICFLAKPF SIRELAEKVR EALS
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