| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3212 |
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| Symbol | |
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| ID | 5696074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3849320 |
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| End bp | 3851104 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641265831 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_001531092 |
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| Protein GI | 158523222 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAACT GCCTGCAGGA GTTTATCACG GCCCTGGACA GGGCCGGCGA GTTGATGCGC
GTCAAGCAGG AGGTGTCGCC GCATCTTGAG ATCAGCCGGC TCACCGATGA ACAGTCCAAA
AGTCCGGGCG GGGGCAAGGC CCTTTTTTTT GAAAAGGTAA AGGGCAGCCG GTTTCCCGTG
GCCACCAATA TTTTCGGCTC CTATCGCCGC ATTCACATGG CCCTGGGCGT AAAAAATCTG
GACGAGCTGG GCGACCGGGT GCGCCAGTAC ACCGAGATGG ACCCGCCCAA AAGCCTGCGC
CAGGCCGCCA GTCTGGTGCC CCGTGCTTTG CAGTTGGCCA GCTTCTTTCC CCGGTCCTGG
GGATCGCGCA CCCCGCCCTG CCAGGAGGTG GTGCACACCG GCGACGATGT GGACCTTTCG
AAAATCCCCG TTCTTCAGTG CTGGCCCAAG GATGGCGGCC CGTTTATCAC CCTGCCCGTG
GTCTTTACGC AAAGCCTTGT CACGGGCCGG CGCAATGTGG GCATGTACCG GTTGCAGGTG
TTTGACAGAA ACACCACGGG CATGCACTGG CACATTCACA AGGACGGCTC CCACTACTTC
AACGAATATG TGGCCGCCGG CAAGCCCATG CCCGTGGCCG TGGCCATCGG CACGGACCCG
GCCACCACCT ATGCCGCCAC GGCCCCGCTG CCCCGGGGCA TCGACGAGAT GATCCTGGCC
GGGTTTATCC GCAAGCAGCC GGTGAAAATG GCAAAATGCG TCACCGTGGA CCTGGAGGTG
CCGGCTTTGG CCGAGTTTGT GCTTGAAGGG TACGTAAACC CCGGCGAAAC CCGGATCGAG
GGGCCCTTCG GCGACCACAC CGGCTACTAC TCCCTGGCCG ATCACTACCC GGTGTTTCAC
GTCACCGCGA TTACCCATCG CAAAAATCCG GTCTACAGCG CTACCCTGGT GGGACCGCCG
CCCATGGAGG ACTGTTACCT GGCCAAGGCC ACGGAACGGC TTTTTTTGCC CATGCTTCAG
GCGGTGATGC CGGAAATCCT CGATTACTGG CTGCCCTGGG AGGGCGTGTT TCACAACATT
GTCATTGTTT CCATTGACAA GGAGTTCCCC GGCCATGCCT ACAAGCTGAT CAACGGGTTG
TGGGGCCAGG GCCAGATGAG CTTCTGCAAG GCCATCGTGG TGGTGGACAA AAATGTCAAC
CCCCAGGACG GCGCGGCCGT GGCAAAGCGG CTGCTGACCC ACCTGGACAT TGACACCGAT
ATCGTGGTGA CAAAGGGCGT ACTGGACGTG CTGGACCACT CAGCCCCGGA CGCCCTGTTC
GGCGGCAAGA TCGGCATCGA CCTGTGCGAC CGGTTTACCG GCGAGCCGGA CCGGAAAAGC
AAAGGCCCGG CCCCGCCGCT GCCCCTGGAC ATGGAGGCCC TTCTCAGGTC CGGCCTGCCG
GAATGCATTG CCTGCCGGGA TCCGTTTGAC GGGCTGCCGG GGCTAAAAGA CGCGGTGGTC
AACCGCATTG TGGTGCTGCA AATCGATAAA CAGCGCCCAG CGGACCAGAT GGCCGAAACC
CTGTTTGAAA TTCAACAACT TGACATGGTT AGGGTGTTTG TATTATTTGA TAGGTCAGTC
GACATCCTAA ACAACGGCCT GATGCTGTGG AAGGTGTTCA ATAATGTGTC CCCGGACCGG
GACATGGTGA TAAAAAAAGG CAGAATGGTC ATTGACGCAT GCAGAAAAGG GCCGGTCGAC
GGCCACACGC GGGAGTGGCC GGATGAATTA ACATTTGATA TTTAA
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| Protein sequence | MFNCLQEFIT ALDRAGELMR VKQEVSPHLE ISRLTDEQSK SPGGGKALFF EKVKGSRFPV
ATNIFGSYRR IHMALGVKNL DELGDRVRQY TEMDPPKSLR QAASLVPRAL QLASFFPRSW
GSRTPPCQEV VHTGDDVDLS KIPVLQCWPK DGGPFITLPV VFTQSLVTGR RNVGMYRLQV
FDRNTTGMHW HIHKDGSHYF NEYVAAGKPM PVAVAIGTDP ATTYAATAPL PRGIDEMILA
GFIRKQPVKM AKCVTVDLEV PALAEFVLEG YVNPGETRIE GPFGDHTGYY SLADHYPVFH
VTAITHRKNP VYSATLVGPP PMEDCYLAKA TERLFLPMLQ AVMPEILDYW LPWEGVFHNI
VIVSIDKEFP GHAYKLINGL WGQGQMSFCK AIVVVDKNVN PQDGAAVAKR LLTHLDIDTD
IVVTKGVLDV LDHSAPDALF GGKIGIDLCD RFTGEPDRKS KGPAPPLPLD MEALLRSGLP
ECIACRDPFD GLPGLKDAVV NRIVVLQIDK QRPADQMAET LFEIQQLDMV RVFVLFDRSV
DILNNGLMLW KVFNNVSPDR DMVIKKGRMV IDACRKGPVD GHTREWPDEL TFDI
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