| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3116 |
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| Symbol | |
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| ID | 5695976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3735585 |
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| End bp | 3737219 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641265733 |
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| Product | WD40 domain-containing protein |
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| Protein accession | YP_001530996 |
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| Protein GI | 158523126 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000226644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCAT TTGGGAAAAT GGCTCGACTG GCGATGACAA CCACCCTTTT TGCCCTGCTG
GTGGTGGGCC AGAATGCAGT GGCCGGCGTT GTGGCTGAAG GCAGCGCCAC CCTGGAGAGC
CTTCACACCG ACGGCACCCA GGGCAACGAT TACAGCGACA TGACCTCAAT TTCAGCCGAC
GGCCGGTTTA TCGCCTTTGA ATCGTCCGCC ACCACCCTGG TGGACACCAC GACCTACGCC
GAATATAACA TTCTGCTGCG GGACACGGCA GAAGGCGTCA CTACCCTGAT AAGTGTTACC
CCTGCCGGCT ATGGAGCAAA CAACAGTTCC CGAAACCCCG CTATCAGCGG GGACGGCCGG
TATGTAGCTT TTGACTCCCA GGCCACCAAC CTGACAGGTC AAGTCACAGG GGACTACCAG
ATATTTATGC GCGACACCGT TGCCGGCACC ACCCAACTGA TCAGCCCCAA CTATGGAGGC
GTTGATACCG GTGCTCCCTA TGGCTATGGC GGAGGCGGAC GAAGCGGACG CCCGTCTGTC
AGCTTTGACG GCCGGTATGT GGCCTTCTAT TCTGATGCCG CCAACCTGAC GGCCGACAGC
GACACTTTCG GCAGTCAGGA TGTGTTTATC CGGGACACCC AGACCGGCAC CACCACCCGA
ATTATGGCCT ATGGCGGAGC ACAGCCTGAC GCCGGCGTGA CCTCCCCGGC CATCTCCGGG
GATGGTTTGG CAGTGGCCTT TCAGTCTGAC GCCACCAACC TGCTGGCAGC CGACAACCCG
GATGGATCAT ATGTTAATAT TTTTGTTTAC GACACCGCCT CCGGCGTCAT CGAGATGATC
AGCCGGGCCT ATGGCAGCGC CATGGCCGAA TTTGATGACC CCACCTATGG CGCGAACGGT
ACTTGCAGAC GCCCCTCCAT CAGCTACGGG GGCCGGTACG TGGCCTTTGA GTCATATGCC
ACTAACCTGG TCGACGGCGG CAGCACCGGA AATCAGGTGT TCGTATACGA CCGGACCACC
GGTGACATGG TGATCGCCAG CGCTGTTGAC GGCGGCACCG CCTGGGGCAA CAGCACCAGC
GAAACCCCAG CCATCTCCTC CGACGGCCGG TATGTGGCAT TCAGATCTAC TGCATCAAAT
CTTGTCGATT TTGAAAACGC CGGCGTTGCC GGCGCCTATC TGCGGGATAC CGTGGAAAAC
AAGACCACCC TGATGTCCAG AAGAGACAAC ATTGTGGCCG GGTATGACGC TGACGCCGTC
TACGGCGCAG CCATGACCTA CTGGCCGGCG GTCAGCGCCG GCGGCATGTA TGTGACCTTT
GGCTCCGACG AAGACACCCT TGTGGCCGGG GATGAAAACA GCGAAAGGGA TATATTTCGC
GTTCTCTATG ATACCGACGG TGACGGCATC GCCGATTCGG ACAGCGATGG CGATGGTACG
CCGGACTGCA CGGATCTCTG CCCGGATGAT CCGAACAAGA TCGATCCCGG GGCCTGCGGG
TGCGGTGTTG CCGACACCGA CGCCGACGGC AACGGCATTG CCGACTGCCT GGAAGACGAC
GAGCCCGAGC CGGCGCCACG TCTGCCTGAC ACCGACATCG GCCCGGATTG TTTCATCTCG
ACGCTTGTTT TTTAA
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| Protein sequence | MTSFGKMARL AMTTTLFALL VVGQNAVAGV VAEGSATLES LHTDGTQGND YSDMTSISAD
GRFIAFESSA TTLVDTTTYA EYNILLRDTA EGVTTLISVT PAGYGANNSS RNPAISGDGR
YVAFDSQATN LTGQVTGDYQ IFMRDTVAGT TQLISPNYGG VDTGAPYGYG GGGRSGRPSV
SFDGRYVAFY SDAANLTADS DTFGSQDVFI RDTQTGTTTR IMAYGGAQPD AGVTSPAISG
DGLAVAFQSD ATNLLAADNP DGSYVNIFVY DTASGVIEMI SRAYGSAMAE FDDPTYGANG
TCRRPSISYG GRYVAFESYA TNLVDGGSTG NQVFVYDRTT GDMVIASAVD GGTAWGNSTS
ETPAISSDGR YVAFRSTASN LVDFENAGVA GAYLRDTVEN KTTLMSRRDN IVAGYDADAV
YGAAMTYWPA VSAGGMYVTF GSDEDTLVAG DENSERDIFR VLYDTDGDGI ADSDSDGDGT
PDCTDLCPDD PNKIDPGACG CGVADTDADG NGIADCLEDD EPEPAPRLPD TDIGPDCFIS
TLVF
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