| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3110 |
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| Symbol | |
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| ID | 5695970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3728062 |
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| End bp | 3728586 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641265727 |
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| Product | shikimate kinase |
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| Protein accession | YP_001530990 |
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| Protein GI | 158523120 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTG TACTGATCGG CTACCGGGGC ACCGGCAAAA GCGAAGTGGG TGCCATACTT
TCCCGGCAAC TGGACATGCC CTGTATCGGC ATGGACGCCG AAATCGTCAG ACGGGCCGGG
TGTTCCATCC CGGAAATCGT GGTAAAACAG GGATGGCCGG GGTTTCGGGA CGCAGAGGCG
GCCCTGGCCC TTGAACTGGC CGGCCGGGAT AACCTGATCA TCGACACCGG CGGCGGTGTG
ATTGAACGGC CGGAAAACAT AACGGCCCTC AAGAAAAACG GACAGGTCTT CTGGCTCACC
GCTTCCGTCG ACACCATTGT GTCACGCATT CAGACCGACA CCCAGCGGCC TTCCCTGACA
GCGGACAAAA GCTTTACCGA CGAGGTGGCC GGGGTGCTGG CCCGCCGGAT CCCCCTCTAC
CGGGCCGCGG CCCATCATGA AATCGCCACC GACGGTCTTT CTCCGGCCCG AGTGGCCGAC
ACCATTGTCT CCCTGCTGCA AGAAGGCTCC GGCCGGCCGG CATGA
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| Protein sequence | MNIVLIGYRG TGKSEVGAIL SRQLDMPCIG MDAEIVRRAG CSIPEIVVKQ GWPGFRDAEA
ALALELAGRD NLIIDTGGGV IERPENITAL KKNGQVFWLT ASVDTIVSRI QTDTQRPSLT
ADKSFTDEVA GVLARRIPLY RAAAHHEIAT DGLSPARVAD TIVSLLQEGS GRPA
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