Gene Dole_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3090 
Symbol 
ID5695950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3702474 
End bp3704057 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content47% 
IMG OID641265707 
Productsite-specific DNA-methyltransferase 
Protein accessionYP_001530970 
Protein GI158523100 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TGACTGAAAA GGCATGTCCT GCTATAGAGA TATTCATAAT ATTCTGTTTC 
TCATTTTATC ACCAAAATCG TCATACCGGA GATAAACATT TGCTGGCGCA AGTCGAACAC
ACCAGGCGGA CGGCTTCGAG GTTGGCTGAT CCGCAACAAA AATCGAGACT GGGCCAGTTT
TTCACTCCGG CTTCAATCGC CTGTTTTATG GCGGAGTTGT TTGTTCCTAA CAGGCGAAAA
AATTGTATTC TGCTTGATGC CGGGGCAGGT GTAGGCTCTC TTAGTGCGGC TTTTTTAGAC
AGGTGGGTTG ATGGTGAGTT TGATTATAAA CATATTGAAC TCCATGCTTT TGAAATTGAT
GAGACGCTAC ATCCCTATTT AAGGCAGACC TTTGAACTCT ACAAAAAAAA ACCGACTATT
ACCTCAACGA TTCGATCCGA CGATTTTATA ATTGCCGCCT GCGACTGGCT GGAGAACAAC
CTTTTTGCCA GACCTTTGCC CAAATATACC CACGCTATTC TTAATCCGCC TTACAAAAAG
ATACGAAGTA ACTCTGAACA CCGGCTGGCC TTAAGAAGGG TCGGCATTGA AACGGTCAAT
CTTTATTCGG CTTTTGTGGC CCTGTCGCTG GCCCTGCTTG ATGATCACGG TCAGCTTGTG
GCCATTATCC CGCGCAGTTT CTGCAACGGC CTTTATTATC GTCCTTTCCG GGAGTATTTG
CTGAAGAAGG CCGCCATTCG TCACCTGCAT CTGTTTACAT CGCGCAGCAA GGCATTTAAG
GATGATAATG TTCTCCAGGA GAATATTATT ATTCATCTGG AGCGCGGTGG TATGCAGGGA
CCGGTCAAAG TATCCACATC CACCGACCAC AGCTTCAATG ATTTGACTGT TCAGGAGCAT
CCCTTTGACC GGATTGTTTT TGTCAACGAC CAGGAACGAT TTATTCATGT GCCGACGGCG
CTTAACCAAA ATATTGTCGA GAGATGCCCG ATGGTATGCT GGTCGCTGGA CGATATCGGT
CTTACGGTTT CAACCGGCCC TGTAGTCGAT TTCCGGGTAA AAGCGCATTT ACGTGAGATG
CCTGGGGTCG GTACGGCGCC CTTGCTTTAT CCGGGACATT TTTCCGACAG CGGGACCGAA
TGGCCGAAGG CCGGGAAAAA ACCCAATGCC ATACTTTGTA ATTCAGATAC AAAAAAATGG
CTTTATCCCA ACGGGTTTTA TTGTCTGGTC CGTCGATTTT CATCAAAGGA AGAAAAGCGT
CGGGTGGTCG CCAGCGTGAT CGAGCCCTCG TTGTTCGGTG ATGCTCCGCT GATCGGGATC
GAAAACCATC TTAATGTATT TCATGAAAAC AGGCAGGGCT TACAAAAAGT ATTAGCCTAC
GGACTGGCCG TTTTCCTGAA CACCACCGCC GTTGATGAAC AATTCCGATG CTTCAACGGC
CACACCCAGG TCAATGCCAC CGACCTTAAA ACGATCAGGT ATCCGAGCCG TAAAATACTG
ACCGTCATCG GAGAATGGGC CATAAGACAG CCGGCGCTTA CCCAGGAAAA GATTGATAAT
TATTTTGAGA CTTTAACCAC ATGA
 
Protein sequence
MKKLTEKACP AIEIFIIFCF SFYHQNRHTG DKHLLAQVEH TRRTASRLAD PQQKSRLGQF 
FTPASIACFM AELFVPNRRK NCILLDAGAG VGSLSAAFLD RWVDGEFDYK HIELHAFEID
ETLHPYLRQT FELYKKKPTI TSTIRSDDFI IAACDWLENN LFARPLPKYT HAILNPPYKK
IRSNSEHRLA LRRVGIETVN LYSAFVALSL ALLDDHGQLV AIIPRSFCNG LYYRPFREYL
LKKAAIRHLH LFTSRSKAFK DDNVLQENII IHLERGGMQG PVKVSTSTDH SFNDLTVQEH
PFDRIVFVND QERFIHVPTA LNQNIVERCP MVCWSLDDIG LTVSTGPVVD FRVKAHLREM
PGVGTAPLLY PGHFSDSGTE WPKAGKKPNA ILCNSDTKKW LYPNGFYCLV RRFSSKEEKR
RVVASVIEPS LFGDAPLIGI ENHLNVFHEN RQGLQKVLAY GLAVFLNTTA VDEQFRCFNG
HTQVNATDLK TIRYPSRKIL TVIGEWAIRQ PALTQEKIDN YFETLTT