| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3059 |
|---|
| Symbol | |
|---|
| ID | 5695919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 3664891 |
|---|
| End bp | 3666654 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641265676 |
|---|
| Product | formate--tetrahydrofolate ligase |
|---|
| Protein accession | YP_001530939 |
|---|
| Protein GI | 158523069 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2759] Formyltetrahydrofolate synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000769965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTACG ATGCAACAAA AATGGCCGAC TGGCAGATTT CCGAGGAAGC GGAAAAGAAC
ATGCCCATGC CCGAAGAGTG GTGTGAGAAG CTGGGACTTG AAAAGGAAGA GATGCTGGCC
ATGGGCCGGC TGTCCAAGCT GGACTTTCTG AAGATCATCA AACGGCTGGA AGCCAAACCC
GACGGCAAGT ACATTGAGGT GACTGCCATC ACCCCGACCC CGCTGGGAGA GGGCAAAAGC
ACCACCTCCC TGGGCCTGAT GGAAGGCCTG GGCGCCCGGG GCAAAAGTGT GGGCGGTGCT
CTGCGCCAGC CCTCCGGCGG CCCCACCATG AACGTCAAGG GCACGGCGGC CGGCGGCGGC
AACTCCCTGC TGATTCCCAT GACCGAGTTC TCCCTGGGAC TGACCGGCGA CATCAACGAC
ATCATGAACG CCCACAACCT GGGCATGGTG GCCATGACCG CCCGCATGCA GCACGAGCGC
AATTACAACG ACGAGCAGCT TCAGCGCCTC ACCGGCATGC GCCGCCTGGA CATCGATCCC
ACCCGCGTTG AGATGGGCTG GATCATTGAC TTCTGTGCCC AGGCCCTGCG CAACATCGTC
ATCGGCCTCG GCGGCCGCAC CGACGGCTAC ACCATGCAGT CCAAGTTCGG CATTGCCGTG
GGCTCCGAGC TCATGGCCAT CCTGGCCGTG GCCACCGACC TGGCCGACCT GAAGGAGCGC
ATCAACAACA TCACCGTGGC CTTTGACAAG TCCGGCAAAC CGGTCACCTG CCGTGACCTG
GAAGTGGGCA ACGCCATGGC CGCCTTCATG CGCAACACCA TCAACCCCAC CCTCATGAGC
ACCGCCGAGT ACCAGCCCTG CCTGGTGCAT GCGGGTCCCT TTGCCAACAT CGCCGTGGGC
CAGAGCTCCA TCATTGCCGA CCGCGTGGGC CTCAAGCTGT GGGACTACCA TGTCACGGAG
TCCGGGTTTG CCGCTGACAT CGGTTTTGAA AAATTCTGGA ACGTCAAGTG CCGTTTCTCC
GGCCTCAAGC CCCATGTGTC GGTTCTGACC GCAACCATCC GCGCACTGAA GATGCACGGC
GGCGGCCCCA AGGTCGTGGC CGGCAAGGCC CTGGACGACG CCTACACCAA GGAGAATCTG
GCCCTGGTGG AAAAGGGTGT CGAGAACATG GTCCACATGA TCGGCGTGAT CCGTAAATCC
GGCATTAACC CGGTGGTCTG TGTCAACCGC TTCTACACCG ACACCGATGC TGAAGTCGCT
ATCGTTAAGA AAGCGGCCGA GGCGGCCGGC GCCCGCTGCG CCGAGTCCAA GCACTGGGAA
AAAGGCGGCG AAGGCGCTTT GGAATTTGCC GATGCCGTTA TTGATGCCTG TGAAGAAGGC
AATGACTTTG ACTTCCTGTA TCCGCTGGAG ATGAAACTGC GCGACCGTGT TGATAAGATC
GCCAGGGAAG TGTACGGCGC CGACGGCGTT GATTGGTCTC CGGAAGCCAC GGCCAAGGCC
GAAATGCTGG AGAACGATCC CAAGTACGCC GACTTTGCCA CCATGATGGT CAAGACCCAC
CTCTCCCTCA CCCACGACCC GGTCAAGAAG GGTGTGCCCA AGGGGTGGCG GCTGCCCATC
CGCGACGTGC TGATTTACTC GGGCGCCAAG TTCCTGTGCC CCTGCGCAGG CACCATCAGC
CTGATGCCGG GTACCGGTTC CAACCCGGCT TTCCGTCGCA TCGACGTTGA CCCGGCCACC
GGCAAGGTCT CCGGCCTGTT CTAG
|
|---|
| Protein sequence | MAYDATKMAD WQISEEAEKN MPMPEEWCEK LGLEKEEMLA MGRLSKLDFL KIIKRLEAKP
DGKYIEVTAI TPTPLGEGKS TTSLGLMEGL GARGKSVGGA LRQPSGGPTM NVKGTAAGGG
NSLLIPMTEF SLGLTGDIND IMNAHNLGMV AMTARMQHER NYNDEQLQRL TGMRRLDIDP
TRVEMGWIID FCAQALRNIV IGLGGRTDGY TMQSKFGIAV GSELMAILAV ATDLADLKER
INNITVAFDK SGKPVTCRDL EVGNAMAAFM RNTINPTLMS TAEYQPCLVH AGPFANIAVG
QSSIIADRVG LKLWDYHVTE SGFAADIGFE KFWNVKCRFS GLKPHVSVLT ATIRALKMHG
GGPKVVAGKA LDDAYTKENL ALVEKGVENM VHMIGVIRKS GINPVVCVNR FYTDTDAEVA
IVKKAAEAAG ARCAESKHWE KGGEGALEFA DAVIDACEEG NDFDFLYPLE MKLRDRVDKI
AREVYGADGV DWSPEATAKA EMLENDPKYA DFATMMVKTH LSLTHDPVKK GVPKGWRLPI
RDVLIYSGAK FLCPCAGTIS LMPGTGSNPA FRRIDVDPAT GKVSGLF
|
|---|
| |