| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2998 |
|---|
| Symbol | |
|---|
| ID | 5695857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 3598304 |
|---|
| End bp | 3599791 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641265614 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001530878 |
|---|
| Protein GI | 158523008 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACTTTA TCAAAATAGT TCTCACAACA GTGGTGTTGG TTTCCATGGT GCTGGCCGTG
GCGGTTGTGG CCACACGGAT CTACCTGGGC AGCCGTTATC CGGCGCCTGC CGCCGGGGCG
ACGGCGGTGC CGGCGGCACC GGTCGAGACA CAGGCCAAAC CGGGCATCAC GATTCTTAAC
ATTCCCCTTT TCATGAGCGT TGACGACCTG GGCCGTGCCC TGGAACAGCA TGTGCCGAAA
ACCTACCAGG ACGTGGACGA CGACCCCACC GACCTGCTGA TTGAAGACCA GATCACCTAT
GACCTGAAGC GGGGGCCCAT TAAAATTTCC ATTATAGAAA ACGGGTTTGA TTTTTCCTTT
TCGGTAACCG GCGTGGTCCG GGCCAGGGGC AAGGTCAACC TGGTGGTGAC CCGGATTCCG
GCCAGCGCCC ATGCCGACGT GGCCGGCCGC ATATCGGGCC GCATCGGGGT GAACATTCTG
CCGGACTGGC AGGTGAAGCC CACGCTGGAT TTCAGCGTAC AGATGGACGA GGCGACCATT
CCCATTGAAA ACTTCGGCAA AATCAGCCTG CGCACCTTTC TTGAAGAAAA ACTCACCAAA
AAGATTCAAA AGGAACGGTA CAAACTGGTA GAAAAGGTGC TGGCCAAAGA CCAGGTGCGA
AAAGAGGTGA CCGAGGCGTG GGCGCAGATG CACCGGGTGG AGCAGGTTCA CGATTTTCCG
CCGGTGTGGA TTCGGGTGGC GCCGCAAAAG GTGGGGCTGA TGCCGCCCAC GGCCAAAGGG
GAAGAAGGAC TGGCCCTGGG GTTACAGGTG GCGCTGAGAA CCGATATGGG CATCTCCAGC
ACCCTGCCCC ATGCGCCTAT AACCCCCCTG CCCGACGCAT CCATACTGGA AACGATCTCC
AACAGATTTC GCATTCGGGT ACCGTTTCAG ATTCACACCG CTGCCGTCAA CAGCTACCTG
GCAAAAACAG TGACCGGAAC GGGCCATGAC CTGGTAAAAG GACTGCGCGT TACAGTGGAC
CGGGCCCAGG TGCTTTCAGC CGAAGAGGAC CGGCTGACCG CCATCGCGTT TGCCACGTTT
ACGCATGACC GTCTGAACAT AAAAACCCAG GCCCGGGTCT ACCTGACCGG CCGGGTGGTG
TATGACGCAA AAGCCGGCCG GATTGAACTG GACGATGTGA CCTATGACGC GGCCTTTTCC
CGGTGGTGGG CCGGCCTGGC CCACTGGGTG GCCGCCCCCT ACGTGGCCCA CCAGGCCCGA
ACACTACTGG TCTTTGACCT GAGCAGGGAA ATCGCAAAGG CAGACAAGGC CATTGACCGG
CTGGTTACCC GGCTGGCCGT GCCGCCGGGG ATAAAAGCCG ACCTGTCTGT GCGATCCCCA
CAGATCAATC ACCTGGGAAT CAACCACGAC GGCATTTACG GTCACCTGGA GTTAAACGGC
ACCCTTGAAG CGGCCCTGGA CTTTGCCGAA CCGGCACCGG TGCCATGA
|
|---|
| Protein sequence | MHFIKIVLTT VVLVSMVLAV AVVATRIYLG SRYPAPAAGA TAVPAAPVET QAKPGITILN
IPLFMSVDDL GRALEQHVPK TYQDVDDDPT DLLIEDQITY DLKRGPIKIS IIENGFDFSF
SVTGVVRARG KVNLVVTRIP ASAHADVAGR ISGRIGVNIL PDWQVKPTLD FSVQMDEATI
PIENFGKISL RTFLEEKLTK KIQKERYKLV EKVLAKDQVR KEVTEAWAQM HRVEQVHDFP
PVWIRVAPQK VGLMPPTAKG EEGLALGLQV ALRTDMGISS TLPHAPITPL PDASILETIS
NRFRIRVPFQ IHTAAVNSYL AKTVTGTGHD LVKGLRVTVD RAQVLSAEED RLTAIAFATF
THDRLNIKTQ ARVYLTGRVV YDAKAGRIEL DDVTYDAAFS RWWAGLAHWV AAPYVAHQAR
TLLVFDLSRE IAKADKAIDR LVTRLAVPPG IKADLSVRSP QINHLGINHD GIYGHLELNG
TLEAALDFAE PAPVP
|
|---|
| |