| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2954 |
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| Symbol | |
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| ID | 5695813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3546205 |
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| End bp | 3547434 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641265570 |
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| Product | integrase family protein |
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| Protein accession | YP_001530834 |
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| Protein GI | 158522964 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGAA AATGGGTAAA AACGACCTTT CCGGGAGTGA GATATAAAGA ACATCCGACC
AGGAAAAACG GAGTCAAGCG CGATCAATAT TTTACGATCC GTTACAAGTT GGCCGGGAAA
GACCGCGAAG AGGGGCTTGG TTGGGCTTCA GAGAATTGGA CGGCGGCAAA GGCTTATGAT
CGTTTAAAGG AATTGAAGGA AAACCGAAAG ACCGGGGAAG GTCCGCAAAC CCTGGCAGAG
AAGCGGGCTA TTGAGGACAA ACGCAAAGAT GCCGACAAGC AAGCGCGACA GTTGGCCGAA
AAGGAAAACG TAACCTTTGG CCGTTTCATG GCTGAAACGT ACCTTCCGCA ATGCAAGCGC
GACAAAAAAC CGACGACTTA TGCAATGGAA GAAGCCCTTT ACCGGGTCCA CCTGGCCGAA
ACAATAGGAA ACCTTCCCTT TGGTAAAATA GCGGCTTTTC ACGTTGAACG GGTCAAGAAA
GCTATGGCCG ACAAAAAGAA AGCTGGCCGA ACCATTCAAT ATGCATTGCA AGTAACCCGA
CAGGTTTTTA ATATGGCGCG AAAGCGTGGA GTCTATACCG GCGAAAATCC GACGAGCGCC
GTTAAATGGC CGAAGCTGGA TAACATGAAG ATGCGTTATT TAAGCATTGA CGAGGCTGAA
AAGCTATTTG ATGCACTGGC GGCAAAAAGT CACAACCTTC ATGACATGGC GCTGTTATCC
CTTCATTCTG GTTTGCGCTT TGGCGAGATT GCGAAGTTAA CATGGAGTTG CGTAAATTGG
AAAGCGGGAA CCCTGGCGAT CCTGGACGCT AAAACAGGAT CAAGAACCGC ATACTTGACG
ACACGGGCAA AGGCTATGCT GAAAAACAGA GAAGAAGGGG CACCAAACGA ACTTATATTT
CAAAAGCGAT CCGGGCTTGA TGGTTCAATA GCGCGCGCCT CAAAAACCTT TTCCAGGGTA
GTCAAAGAGT TAGGCTTGAA CCAGGGAATC ACCGACAGAA AGCAAAAAGT GACATTTCAT
ACCCTTCGGC ATTCTTATGC AACGCACCTT TACGAAAGCA CACACGACCT GTATTTAACC
CAGAAGTCAC TTGGGCACAC TACAAGCACC ATGACCCAAA GATATGCGAA GATGACCGAA
AACAGATTGA GAGAGGGCTC GGCGGCATTG GAGGCGGCAT TTAAAACGAA CGGGCAGAAA
AAGAAAAAGA ATGCCGGGCA GGTGTTGTGA
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| Protein sequence | MAGKWVKTTF PGVRYKEHPT RKNGVKRDQY FTIRYKLAGK DREEGLGWAS ENWTAAKAYD
RLKELKENRK TGEGPQTLAE KRAIEDKRKD ADKQARQLAE KENVTFGRFM AETYLPQCKR
DKKPTTYAME EALYRVHLAE TIGNLPFGKI AAFHVERVKK AMADKKKAGR TIQYALQVTR
QVFNMARKRG VYTGENPTSA VKWPKLDNMK MRYLSIDEAE KLFDALAAKS HNLHDMALLS
LHSGLRFGEI AKLTWSCVNW KAGTLAILDA KTGSRTAYLT TRAKAMLKNR EEGAPNELIF
QKRSGLDGSI ARASKTFSRV VKELGLNQGI TDRKQKVTFH TLRHSYATHL YESTHDLYLT
QKSLGHTTST MTQRYAKMTE NRLREGSAAL EAAFKTNGQK KKKNAGQVL
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