Gene Dole_2925 details

Gene Information

• Locus tag: Dole_2925
• ID: 5695784
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 3510579
• End bp: 3512621
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641265541
• Product: N-6 DNA methylase
• Protein accession: YP_001530805
• Protein GI: 158522935
• COG category: [V] Defense mechanisms
• COG ID: [COG0286] Type I restriction-modification system methyltransferase subunit
• TIGRFAM ID: [TIGR00497] type I restriction system adenine methylase (hsdM)

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCACCA AACAAGCATT AGGCAGCACC CTTTTCGGAA TGGCTGATAT TCTCAGAGAC 
AAGGTTGAGG ACTACAAGTC TTACATCCTT TCACTCCTCT TTTTCAAGCG ACTTTCCGAT 
AACTATACGT GGGAAAGCGA AAATGGAATC AAAGAGTTTG TAAAAGACAA TAAACGTGAG 
CCAAATGATA GAGAAAAAGA AATAATTCTC AGAAGGAAGC ATGACTTTAC CATTCCTGAT 
GGGTGTTTCT GGGGGGATGT TCGTAATGCG CCGCTTGATA AAAAGAACGA TGCCTTAAAC 
AAGGCGGTGA ATGCCATTGC CGATTCCAAC ACCTCTCTTA AGGGTGTCAT CAATACTGTA 
CGTTGGAATG AGCCCTCACC GGATGGTTCT GGCGGAAAGA AGCTGCACCC TGAAGTACTG 
AGTCCGCTGA TCAACTATCT GGATGCGGTT GATTTGAGCA ACCGCAACGC CTCTGTGGAT 
ATTCTGGGCG ATGCCTACGA ATATTTGATC AAACGGTTTG CGGACGAAAA CAGGAACGGT 
ACCACTGCCG GACAATTTTA TACCCCGCAA GAGGTTGTCG ATATCATTGT TCGTTACCTC 
AAGCCTCAAA AGGGAAGCAC TCTTTACGAC CCCACCTGCG GCTCCGGCGG CTTCTTGATC 
AATGCGGCCA AGTACATCAA AAAAACGACC GGAACCCAGA AAAACATCCG CCTTTTTGGG 
CAGGAAGATG TCTGGAATAC CTGGGCGATT GCCAATATCA ACATGATTCT CCATGGGCTT 
GATGCCGCCA TAAAAAAAGG CGACACCCTG AAAGATCCCA AATTCACGGA AGAGGACAAC 
GACCTTACCA TTAAAACCTT TGATCTGGTG ATGGCTAATT TTCCGTTCTC GCAGGAAAAC 
TGGTGGAAAA ACGGGGAGCC CAAGAGAGAT AAAAAAGGTA AGCCCATTAC CAATAAAGAC 
GGTTCTCCTC AGTTGAATTA TCCGGGCAAA GAAGATTTTA ACGATCCATA TGAACGTTTT 
GATTATGGAA TTCCGCCTTT TTCAAACGGA GACTTTGCCT TTCTTCAGCA CATTGTCGCT 
TCGATGAATG AAAGCGGCAA GGCCGGAGTC GTTTGCCCGC AAGGCGTGCT GTTTCGTGGT 
CAACCACAAA AAACCGAAGA GGAAGATGGC CAAAATCGGA AGGCCGATGA TGAATACCTG 
ATCCGTCGCG GCTTTTTGCA GGGGCCGGTC AACAAGGATG GCGAATTTGT TCATGCCATA 
AATATCATAG ATGCCATAGT CGTGCTACCT GGCAACCTCT TTTATGGCAC TACTATTCCT 
GGCTCCATCC TGCTGTTTAA TAAAAACAAA CCGGAAGAGC GAAAAAACAA GGTGCTGATG 
GTCTATGCCG CCAAAGAAGG CTGGTACAAA GAAGAATCCA ACATGAATAC GCTCCTGCCT 
CAGGACATCT TGCGTATCTC CACTATTCTT GAAAGCTGGG GCGATATGGA GATAGCCAAA 
GCATGGATCA CTTCCCAAAA ATCCAGACTG AGAGACCTGA TCCAGGAAGA ACTTGATTTC 
AAAAAAGGTG AAATTGATCT GGATACCCAG GAAGATATAG AGCTGGCCAA AGACAAGCAC 
CAGAAGGCCG GCGAGCTGGT AAAAGCCAAG GAAGCGGAGG GCAAGAAACC GACCCAAGCT 
CAGCTCAACA ATCTACAAAA GGCTAAAGAA ACTCTTGAAA AACTGATTAA ACAGAAAGAG 
CAGCGCATTG CTGATGCCGA AGGACAGGCT GAAAAAGAGC GCATCGCTAT TGATGAGGTG 
GAAACCGAAC TTTTGACCAT GCTGGCCGAT CCGGAGCTGC GTAAACGCTA TTTCTCCGTA 
GTGGATATGG AAGAGCTGGA AGAAAACGAG TTCAACCTCA ATATTCCCCG CTATGTGGAT 
ACTTTCGAGC CGGAGGAAGA GATTGATCTC AAGGAGGCTA TTGAAGGGTT TGAAAGCGCC 
ATGGATTATG AAGCGAAAAT TACCTCATTC ATCTCAAGCA TGAAACAGTC ATTGGGGATG 
TAG 

 

Protein sequence

MITKQALGST LFGMADILRD KVEDYKSYIL SLLFFKRLSD NYTWESENGI KEFVKDNKRE 
PNDREKEIIL RRKHDFTIPD GCFWGDVRNA PLDKKNDALN KAVNAIADSN TSLKGVINTV 
RWNEPSPDGS GGKKLHPEVL SPLINYLDAV DLSNRNASVD ILGDAYEYLI KRFADENRNG 
TTAGQFYTPQ EVVDIIVRYL KPQKGSTLYD PTCGSGGFLI NAAKYIKKTT GTQKNIRLFG 
QEDVWNTWAI ANINMILHGL DAAIKKGDTL KDPKFTEEDN DLTIKTFDLV MANFPFSQEN 
WWKNGEPKRD KKGKPITNKD GSPQLNYPGK EDFNDPYERF DYGIPPFSNG DFAFLQHIVA 
SMNESGKAGV VCPQGVLFRG QPQKTEEEDG QNRKADDEYL IRRGFLQGPV NKDGEFVHAI 
NIIDAIVVLP GNLFYGTTIP GSILLFNKNK PEERKNKVLM VYAAKEGWYK EESNMNTLLP 
QDILRISTIL ESWGDMEIAK AWITSQKSRL RDLIQEELDF KKGEIDLDTQ EDIELAKDKH 
QKAGELVKAK EAEGKKPTQA QLNNLQKAKE TLEKLIKQKE QRIADAEGQA EKERIAIDEV 
ETELLTMLAD PELRKRYFSV VDMEELEENE FNLNIPRYVD TFEPEEEIDL KEAIEGFESA 
MDYEAKITSF ISSMKQSLGM