Gene Dole_2916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2916 
Symbol 
ID5695775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3503163 
End bp3503666 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content51% 
IMG OID641265532 
ProductDNA repair protein RadC 
Protein accessionYP_001530796 
Protein GI158522926 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGACC AAGCAAAGTT CTGGCGGCAG TTAAAGTCCG GGCATTTTGT ACCGATGGTC 
AAGGAGGCGG TAAGGGGGCA GGAGATCAGC AGCGCCCAGG AGGTCTACAA CATCATGAAG
CCGGTCTTTG CCGAAACCGA TGATGTTGAA ACACTTTACT GCCTTTATCT GGACACGAAA
AACAGAATCC TGGCCATGGA AAAGATGTTT ACCGGTAGCC TTTCCAGTAC GGCAGTTTAT
CCCCGGGAGA TTATCAAGCG GGTCATTGCC CTTAAATCTT CCGCTGTTGT GATTACCCAT
AACCATCCTA CTGGTGATCC CGGCCCGTCT GTCGAGGACA CAAGAATCAC CATCCGGTTG
CTGGTGGCCT TAAAAAGCAT GAATGTGGAC CTGCATGACC ATATCATTGT CGGTGAAGGA
TATTACAGTT TTGCCGATGC CGGTGTGATC GGGTCAGCGG ATGTCCGGTT TTGTGACTTT
CTGTGCCGGT TGTCCCGGGA ATAA
 
Protein sequence
MEDQAKFWRQ LKSGHFVPMV KEAVRGQEIS SAQEVYNIMK PVFAETDDVE TLYCLYLDTK 
NRILAMEKMF TGSLSSTAVY PREIIKRVIA LKSSAVVITH NHPTGDPGPS VEDTRITIRL
LVALKSMNVD LHDHIIVGEG YYSFADAGVI GSADVRFCDF LCRLSRE