| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2906 |
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| Symbol | |
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| ID | 5695765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3493451 |
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| End bp | 3494524 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641265522 |
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| Product | integrase family protein |
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| Protein accession | YP_001530786 |
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| Protein GI | 158522916 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0825768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTTT ATTCTGTAAC AGGGAAGGGG TGGAGGTACG ACTTCACCCA CATGGGGACC
AGGTACACGG AAGCCTGGTT CAAAACAAAA AAAGAGGCCA ATCAGGCAGA GGCCGAAAAA
CGAAAGGAGA TAAAAAACCC GAAGCCGGTT CTGGAGACGC CAACAGACAT GGCCTTCTTG
GAACTGGTGA ACCAAAAGCT TGACCATGTC AAAGCCTATA ATTCAAAAAG CCACTACATA
TCCTATCTGT ATATGGCGCG GCGATGGGCT AACCTTTGGG GGCACTTGCC TTGTGGTGAG
CTAACGGGAG ATATGATTCA GAAGCACCTT TATCAGCGGC ATAAAGTCTC CGCATATACC
GCCAATCAGG ACCTGCGGTA CCTGCGGGCT GTCTTCAATT TTGGGGTCGG ACAAAAGATG
ATTTACACCG ACCCTACGGC GGGCATACGG TTTTTCCCGG TTGAAAAAAA AATCAAGTAT
GTGCCATGCA GTGAAGACAT TGACAAAGTG ATAGCCGCTG CAGATCCTGA TACACAGGAC
TATCTCTGGG CGATCAGGGA AACCTTGGGC CGCGTGAGTG AAATAAACAG GCTCGTGTGG
GAGGATATAA ATCTGGATGA GCGCTTTATC ATCCTCTATA CCCGCAAAAA GCGTGGTGGT
CATTTGACTC CGCGAAAGGT GCCAATGACC GAAAAACTAC ACGATGTTTT ACAAAACCGA
TTTAATCGGC GTTCTCCCGA CGTCCCTTGG GTATTCTGGC ACCGGTTTTG GAACAAGAGA
AACGGTGAAT TCAACATCGG CCCATACAAG GATAGAAAGC GCTTTATGAA AAGCCTTTGC
GAAAAAGCAG GTGTTCGGTA CTTTCGATTT CATGCACTTC GACATTCCGG TGCATCTATC
ATGGATGGTA ATGATGTGCC TATTGCCGCC ATACAGCGAA TTCTGGGGCA TGAGAACCGC
AAGACAACCG AAATCTATCT TCACAGCATG GGTGACATGG AACGTAATGC AATAGCCGTT
TTTGAGCGTG CAAGGGGAAA GTCTCACACA GACTCTCACA CAACAATGGG GTAA
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| Protein sequence | MSVYSVTGKG WRYDFTHMGT RYTEAWFKTK KEANQAEAEK RKEIKNPKPV LETPTDMAFL
ELVNQKLDHV KAYNSKSHYI SYLYMARRWA NLWGHLPCGE LTGDMIQKHL YQRHKVSAYT
ANQDLRYLRA VFNFGVGQKM IYTDPTAGIR FFPVEKKIKY VPCSEDIDKV IAAADPDTQD
YLWAIRETLG RVSEINRLVW EDINLDERFI ILYTRKKRGG HLTPRKVPMT EKLHDVLQNR
FNRRSPDVPW VFWHRFWNKR NGEFNIGPYK DRKRFMKSLC EKAGVRYFRF HALRHSGASI
MDGNDVPIAA IQRILGHENR KTTEIYLHSM GDMERNAIAV FERARGKSHT DSHTTMG
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