Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2900 |
Symbol | |
ID | 5695758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3486185 |
End bp | 3487579 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641265515 |
Product | peptidase C14 caspase catalytic subunit p20 |
Protein accession | YP_001530780 |
Protein GI | 158522910 |
COG category | [R] General function prediction only |
COG ID | [COG0666] FOG: Ankyrin repeat |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000126613 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAGCT GCATGAGACG AATATTTTGG ACGCTTGTGG CTGTCGCGGC CATTGCCTCG CTGACCGGTT GCGGAACCGC GCTGAGCCGG GCCGCACAAA AGGGTGATGT GGCTGCCATG GAAAAACTAC TAAACAAGGG CGCGGATATC AATGAAAGCG CTGCGGGGGG CACCATTGCG GGGCCACCAT TGTCACATGC GGCGCATCAC TGCCAGCCTG AAGTGGTCCG ATATCTGGTC AGCAGGGGCG CGGATGTAGA GGCCACCGGT TTCGGTGGAG CGGGGTGGCG GCCCCTGCAT ATTGCTGTCG ATGCAGGCTG TATTAAGGCG GTAGAGATAC TTCTGGATGC AGGCGCTGAT ATTAACGCCA AGGCCAATAA CAGGTGGGGA TCGGCTCTGG CCATCGCGGC GATGAATGGT GATGGCAGGC TGGTCGAATA CCTGATCAGC CGGGGGGCTG ATGTGGATGA CGCCGCCTCT GTATTGAGAC GATGGACGTC ATCATCGCTT TTTGATGAGG ACGGCCACGG CCATGCTGAA GGATTGGCCC TGCTTGAAAA GTATGCCCGG CCCATGGCAA CGGCCGCCGT GTCTTCCCCT CAAACGTCTG TCACGGCAGT CGTCCGGTCC GACGTGGATA TGGTTCCCTA TTGGAAGGCA TCGCCCCGGC CCGATGCCTT TGCCGTGGTG ATCGGCATTG AATCCTATCA GACTATTCCC CGATCCGACT ATTCCAAAAA AGACGCGGAA ACGATCAAAA GCTATCTAGT GGCCCTGGGG TTTCAGGAAA GAAATGTCGA GCTGATGACC GACCAGCGGG CCACCCGATC CGGCATGGCA AAGGCCCTGG AGGCATGGCT CCCCAACCAG GTGACCAACC AGAGCACGGT GTTTGTCTAT TTTTCCGGCC ATGGCGCGCC GGAACCGGCC ACCGGCGAAT CCTATCTGGT GCCTTATGAC GGGGACCCCA ACTATCTCGG CGTGACCGGT TATTCTTTAA AGAGGTTGTA TGACAGCCTG GGGAAACTTC CCGCCAAAGA GATCATCGTG GTGCTGGATT CCTGTTTTTC AGGTGCCGGC GGCAGAAGCG TACTGGCCAA AGGCGCCCGG CCACTGGTAA TGACGGCCGC CGCCGGCCCG ATGCCCGCCC GCGTGGCCGT GCTGGCCGCG GCCCAGGGCA GCCAGATATC CACCTCTGCC CCGGACAAGG GCCACGGCAT TCTGACCTAC TATTTTCTCA AGGCTTTAAA AGACGGCAAA ACCGACCTGG CCGATATCTA TACAACCATC CGCCCCCAGG TGGAGGACGC TGCCAGGCGG CTTAATGTGC AGCAAAGCCC CAGTCTCGCG CCGGGCGCGG ATACGATTAA AAACAGGTTC AGCCTGATAG AATAA
|
Protein sequence | MRSCMRRIFW TLVAVAAIAS LTGCGTALSR AAQKGDVAAM EKLLNKGADI NESAAGGTIA GPPLSHAAHH CQPEVVRYLV SRGADVEATG FGGAGWRPLH IAVDAGCIKA VEILLDAGAD INAKANNRWG SALAIAAMNG DGRLVEYLIS RGADVDDAAS VLRRWTSSSL FDEDGHGHAE GLALLEKYAR PMATAAVSSP QTSVTAVVRS DVDMVPYWKA SPRPDAFAVV IGIESYQTIP RSDYSKKDAE TIKSYLVALG FQERNVELMT DQRATRSGMA KALEAWLPNQ VTNQSTVFVY FSGHGAPEPA TGESYLVPYD GDPNYLGVTG YSLKRLYDSL GKLPAKEIIV VLDSCFSGAG GRSVLAKGAR PLVMTAAAGP MPARVAVLAA AQGSQISTSA PDKGHGILTY YFLKALKDGK TDLADIYTTI RPQVEDAARR LNVQQSPSLA PGADTIKNRF SLIE
|
| |