Gene Dole_2843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2843 
Symbol 
ID5695701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3424565 
End bp3425101 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content52% 
IMG OID641265458 
Productouter membrane chaperone Skp (OmpH) 
Protein accessionYP_001530723 
Protein GI158522853 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TTGTTATATG CATGAGCGTG ATGGCACTGG TGTGCATGGG GTGCTCCTTG 
CCCTGCTTTG GCGCTGATGT GGCGAAAATT GGGGTGGTGG ACATTCAGAA GTTTTTCAAG
GAGTCCGATA TCGGCAAGGC GGCCAATGCC CAGGTGGAAA AGGAACACGC AAAACTCAAG
GCCGATCTGG AAGCGGCGGC CCAGGAGGTC CAGACGCTTG AAGCAGAGCT GGAGCGCGAC
GCCATGGTGA TGTCCGAGGA GAAACGCGAG GAAAAGGATC GCGCGTTTCG CATCAAGAAG
TACGATTTTC AGGTGCTTCA GCAAAAATAT TCGGAAAATT TAAGAAAGGT CAACCAGGAG
ATGCTGCGCA AGCTTGACAC GAAACTCACC AGGCTGACCC AGGAGTTCGG CACCAAGGAA
GGGCTGCTGT TGATGGTCGA AAAGGGGTAC ACCATGTATT ATCCCAGTGC CATTGATGTC
ACCGACAAGC TGATCGTGTT TGCCAATTCC AAAAAATTGA CCCTGGACGG GGAGTAA
 
Protein sequence
MKKFVICMSV MALVCMGCSL PCFGADVAKI GVVDIQKFFK ESDIGKAANA QVEKEHAKLK 
ADLEAAAQEV QTLEAELERD AMVMSEEKRE EKDRAFRIKK YDFQVLQQKY SENLRKVNQE
MLRKLDTKLT RLTQEFGTKE GLLLMVEKGY TMYYPSAIDV TDKLIVFANS KKLTLDGE