| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2628 |
|---|
| Symbol | |
|---|
| ID | 5695479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 3170701 |
|---|
| End bp | 3172314 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641265236 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001530508 |
|---|
| Protein GI | 158522638 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACCGGT CCCGGACAGA CGCACTGCTG ATCTCGCTCC AGGTCGATCT GGACACCATC
GGCCTGAAGC AGATTCATGC CGTTTTGCAG GATCGGGGCT TTAGTTCGCT GCTGCTCTAT
CTTCCCTCTT TTTCCCCTGG CGATAATGTT CTGATGGAAC AGGTTGTCCG TTTTGTCGCC
GATCGCAATC CCGGGTTTGT GGGCATCAGC CTGATGTCCC ATGAATTTTC CGGTGCGGCG
GCCCTGACCG GTCGCCTCAA ACAGGCCTTC CCCTGCCTGC CGGTCATCTG GGGCGGAATT
CATCCTACCA TCGCGCCGGA AATGTGTCTG GACCATGCGG ATTATGTCTG CGTGGGCGAA
GGTGAACACG CGGTGGCGGC GCTTGCCCGT GCCTTTCGGG AAGAAAAAAC CGTTGAGCAT
ATTTCCAACA TCTGTTATCG CCGGCAAGGA AAGATCGTCC GAAACCCCCT GGAACCGGTC
ATCCAAAACC TGGATAGCCT GCCCACCTGT GAGCATCTTC CAAGAGGTTC TTATATCGCG
CACCGGGGAA GCATTGTTTC CCTGGATCAC CATCAGTTAA AGCGCTACGG CCGTTGGCGC
GGTACAATAT ACAGCACCAT GAGCAGCCGG GGCTGCCCGT TTGCCTGCGC CTACTGCTGC
AACGATTTTT TATCCAGGCT TTATGACACC AGGAAGATAC GGCGCCGGAG TGTGGCCAGT
CTTATGCCCG AACTGTCCAG GGCCGTTGCC GATCATCCGG AAATTCAATA TATCAACTTT
CAGGATGACT GTTTTCTGGC CTGTTCCGAC GCCTATCTGG AAGCGTTCTG TCATGCTTAT
CGCCAGAAGA TCGGCCGTCC ATTTATAGTC CGGTGTATTC CCGCTTTTGT GGATGCCGGC
CGGTTGAAAA AGCTCAAGGC GGCCGGCCTT GTCTGGATGT CTCTTGGGTT GCAGTCCGGC
AGTGATCGTG TGTTGTCCGA TGCCTACAAC CGGCATTCCA CATCCGAACA GTTTCTGGCA
GCGGCCCGGC TGGTGCATGA AGCCGGTATC GCGGCTTACT ATGACGTCAT TCTGGACAAT
CCCCTGGAAA ACGACGAAGA CCGTTACAAA ACCATTGAGG TGCTGACAGC TGCGCCCCGA
CCTTATTTTC TTCAACTGTT TGCCCTGACG CTTTATCCGG GCTCCTCTCT GTATGAAAGG
ATAACTGCCG ATTCCCCTGG ATTGGCCGAC GCTTATCTGC ACAAGAATTT TTATCATTAC
CGGCATACTT CCATGAACAA ATTGATTCGG ATTTCAGCTT ATTTGCCGGT GTCCGCTGTA
AGGAGGCTGA TTTCGTATGG CAGAAGCCGG CCGCAAAGCG CCGGATTCCG GCTGACGCTT
ATCACGGCCG GACTCTTGTC CACCCTGATG TTGGAACCGC TGGCCTATTT CCGGGTGATT
CAAGTAAGCC AGCACGGAAG TGTAAAAAGA ACACTCAAAC AGATTCCGGT CTTTTTTAGA
ATCGGTTTCA GCCGCTATGT TAAGCAGTTT TCCAGCAGCC TGACAACGAT TGCCGAACGA
TGGGTGAGGG ATGATCTGAT ATCCGGAAAC CAATCAAAAA ATTTTCGCCG GTGA
|
|---|
| Protein sequence | MNRSRTDALL ISLQVDLDTI GLKQIHAVLQ DRGFSSLLLY LPSFSPGDNV LMEQVVRFVA
DRNPGFVGIS LMSHEFSGAA ALTGRLKQAF PCLPVIWGGI HPTIAPEMCL DHADYVCVGE
GEHAVAALAR AFREEKTVEH ISNICYRRQG KIVRNPLEPV IQNLDSLPTC EHLPRGSYIA
HRGSIVSLDH HQLKRYGRWR GTIYSTMSSR GCPFACAYCC NDFLSRLYDT RKIRRRSVAS
LMPELSRAVA DHPEIQYINF QDDCFLACSD AYLEAFCHAY RQKIGRPFIV RCIPAFVDAG
RLKKLKAAGL VWMSLGLQSG SDRVLSDAYN RHSTSEQFLA AARLVHEAGI AAYYDVILDN
PLENDEDRYK TIEVLTAAPR PYFLQLFALT LYPGSSLYER ITADSPGLAD AYLHKNFYHY
RHTSMNKLIR ISAYLPVSAV RRLISYGRSR PQSAGFRLTL ITAGLLSTLM LEPLAYFRVI
QVSQHGSVKR TLKQIPVFFR IGFSRYVKQF SSSLTTIAER WVRDDLISGN QSKNFRR
|
|---|
| |