| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2626 |
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| Symbol | |
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| ID | 5695477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3168004 |
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| End bp | 3169767 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641265234 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001530506 |
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| Protein GI | 158522636 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAACA CAACCCGACA ACAGTCATCA GCATTGCTGT ATACAAGAGT AGCGGTTGCC
GCGCTGGTCA TATGTCTCTT GAGCGGGGCA ATATATTTTC AGTCCATGCA CTTCGGTCTT
GTTATGGCGG ACGATATCGA TCTTTTTGAA TATATGGCTC ATCAGCCGGA CAGGTTCTGG
CATAACACAC GCATGGCATT TACGGAGATG CCGGGTCATG TTCCGTATTG GATTCCGGTG
AGCATGGCGT CGTATTTTGC TGACTATGAG CTTTTTCGGA TGGATCCCGG AGGATACCAT
CTTACCAGTG GGGTGTTGCA CGGGATTACG GCAACCGTTT TTTTTGTGTT GTTGTTTCAA
ATGACCGGAT GTTTCTGGAA GAGCGTGGCA GCCGCTGCCA TCTGGGCCGT TCACCCCCTT
CATACCGAGT CTGTGGCATG GATTCCCGGC AGGGCAGGCG TTTTGAGTGT TTTCTGGACG
ATTCTGGCTG TCATGGCTTA TGTAAGTTAC ACGAAAACGG GACGGTGGTG GAAGTCTCTG
CTTGCCTGTC TGTTTTTTAT CTTAGGACTT TTGTCCAAGC CCGCTATTAT TCTTTTTCCC
GTTTTTCTCC TGCTGCTGGA TTATTGGCCT TTGCAACGGA TTATCCCATT TGATGCGGAT
CGGCAGATAG AAGAAAAATC GCTGGTTTCC CTGAAGTGGT TAATCATTGA GAAGCTCCCG
ATCGCGGCCA TTGGGGCCGG GGCGGTTCTG TTCGGCCGGT TTTTTTTTCA GGCCACGTCG
ATGGCTCAGT CCATGCAAGA GGGAAGTTTT CAGCCGGAAC TGCTGCTCAA CATTCCGGTG
GTCTATGTCA CCTATTTATG GAAGACCCTG GTGCCGTCCG GGCTTCCCGC TTATGTGCCG
CCCATGGCGG GGTATCTTGT ACCCCTGTGG CAGATTATGG GAGCGTTTAC AATAATCACT
GTTGTCACGC TGGCGGTCAT TCGTTTTCGT AAAAAAGCGC CTTATCTTCT CGTCGGCTGG
GGATGGTTTC TGATCGGGCT GGCGCCTTTT TTGCCGGTCT GCGTGGGACA GCATCGTTTT
CTGCTGCAAC GCTATGCCTA TCTGCCGGTG CTGGGGCTGG TGCTGGGAAT TGTGTGGGGC
TGTGCCGCCC TGATGCGCCG GCTCGGTTTG AGCAGGTGCA TCAGGGCGGT GGCAGCCGTG
GCCGTGGTGG CGATGCTGAC GGTTATTTCC CATGCCCAGA CGCGGCACTG GGCGGATTCG
CTTTCATTTT TCAGGCATGC GGTCGAGGTC CGTCCCGCTT GCAGCCAGAC CCGGGCCAAC
TATGGAGAGG TTCTGTTTCT TCACGGCCGA AACGCCGAGG CGATCGGCCA GCTTGAAGCC
GCCCTGGCCG TTGACCCAAA CAATGCCCTG GCGCACTATC ATTTGGGAAG GGCCATGGAG
AGCGCCGGAA ATTCTGAGGC GGCAATGCGC CATTTTGAAA AAGCCGTGTA CTTGCAGCCG
GATCATGTGC CGGCCCGCAA CAGCCTGGGC AATCTCCTGT GTGACACGGG CCGGATCGAC
GAAGCCATCG TGCACTACCA GAACGCCCTG GCCGCCGATC CCTCGGCTTT TATGGTTTAC
AACAACCTGG CAACAGCGTT GACCCTCAAG GGAGATTATG AAGCTGCCGG TGATATGCTG
AAAAAGGCCC TGGCCATTCA TCCCGGATAT GCGACCGCCC GGGAAAATCT GATGCGGATC
GAACGGCTCA AGGCCGGCAG GTGA
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| Protein sequence | MLNTTRQQSS ALLYTRVAVA ALVICLLSGA IYFQSMHFGL VMADDIDLFE YMAHQPDRFW
HNTRMAFTEM PGHVPYWIPV SMASYFADYE LFRMDPGGYH LTSGVLHGIT ATVFFVLLFQ
MTGCFWKSVA AAAIWAVHPL HTESVAWIPG RAGVLSVFWT ILAVMAYVSY TKTGRWWKSL
LACLFFILGL LSKPAIILFP VFLLLLDYWP LQRIIPFDAD RQIEEKSLVS LKWLIIEKLP
IAAIGAGAVL FGRFFFQATS MAQSMQEGSF QPELLLNIPV VYVTYLWKTL VPSGLPAYVP
PMAGYLVPLW QIMGAFTIIT VVTLAVIRFR KKAPYLLVGW GWFLIGLAPF LPVCVGQHRF
LLQRYAYLPV LGLVLGIVWG CAALMRRLGL SRCIRAVAAV AVVAMLTVIS HAQTRHWADS
LSFFRHAVEV RPACSQTRAN YGEVLFLHGR NAEAIGQLEA ALAVDPNNAL AHYHLGRAME
SAGNSEAAMR HFEKAVYLQP DHVPARNSLG NLLCDTGRID EAIVHYQNAL AADPSAFMVY
NNLATALTLK GDYEAAGDML KKALAIHPGY ATARENLMRI ERLKAGR
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