| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2609 |
|---|
| Symbol | |
|---|
| ID | 5695460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 3151652 |
|---|
| End bp | 3152140 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641265217 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001530489 |
|---|
| Protein GI | 158522619 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4891] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0546074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCCTAA AATCTTTCTT AGACACAAGA AGACACAGCA TGTTTAAAAA AGAAATCCAT
ACCGAAATTG ATATTGACGC AAAACCGGAT GTCGTCTGGA ACGTGCTTGT GGACCTTGCC
GCCTATCCGG AATGGAACCC CATGGTTAAA GAAGCCGGCG GCGCGGTTCA GGCCGGGCAG
CGGCTTTGCT TGCGTTATCA CCCGGAAGGG CAGAAAAGCC GCATATTCAA ACCGTTGCTG
CTGGTCGTCC TTCCCGGCAG GGAGCTGAGA TGGCAAGGTC AGCCCGGTAT CCGCTTTCTG
CTTGAAAGTG AGCATATCTA TCTGCTGAAA GAGACGACCG GCGGAAAAAC TCATCTCGAT
CACGATATGG TATTTTGGGG GCTGCTGATC CCCCCGGTGA AAAATCTCAT TGATAAAACG
ATACGGGGCC CTTTCAACGA CCTGAACAGG GCCCTCAAGC TCAGGGCGGA AGGGATGGGC
ACCAACTGA
|
|---|
| Protein sequence | MTLKSFLDTR RHSMFKKEIH TEIDIDAKPD VVWNVLVDLA AYPEWNPMVK EAGGAVQAGQ
RLCLRYHPEG QKSRIFKPLL LVVLPGRELR WQGQPGIRFL LESEHIYLLK ETTGGKTHLD
HDMVFWGLLI PPVKNLIDKT IRGPFNDLNR ALKLRAEGMG TN
|
|---|
| |