Gene Dole_2553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2553 
Symbol 
ID5695404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3088987 
End bp3089796 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content60% 
IMG OID641265162 
Producthypothetical protein 
Protein accessionYP_001530434 
Protein GI158522564 
COG category[S] Function unknown 
COG ID[COG2043] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAT CACTGGAAAA GTACAGGGAG TATGGCCGGC GGATCGAAGA TCTGATCCGG 
CCGGCGACCT TTCCCCTGGC GGTAAAAATT GTCCGGCCGG AAGATGAAAT CGCGCCCGAA
TACAAACGTC CCTTCAGGGA CCTGGGTGTG CAGAATTTTG TATGCCAGAA TTTTAAGATG
GCGCGTACCT ATGGGTGGAC CATTGCCGTT ACCGGGGCGG ACATCAACTG CAAGCTGGCC
CGGGCGCTGT ACGGGTGGGA CACGCTTACG GACCAGGAGC GGGAGTGGGC CGAGGATTTC
AGCGTGGGGC TTTATTCAAA GGACCGGGAA ACGGCCGGAA AGTTCGGCCG TCATCTTTAC
GCGCTGGACG AACCCTTCGC GGGTTTGATT ATCTCGCCTT TGACACGGAC AAAGATCGTT
CCGGATACCG TGCTGGTATA CTGCCTGCCG GCCCAGGCCA TGCGGTTTGT CCAGGGCTAC
CTTTTCATGG AGGGGGGTGT TCTGGAGTTT GCCGCCGCCG GAAGGGTGGG CTCCTGCCAT
GAGGGGGTGA CCAAGGTCCT GAAAACCGGC AGGCCCCAGT ATGTCACGCT GGGTAACGGC
GACCGCGTCT GGGGCGGTGC CCACGACCAC GAGGTGATGT TTGCCTGCCC GGCGGAAAAA
CTGGATGTCC TGATGGAAGG GCTGGAAACA ACCCATGCGG CGGGCCTGCG CTATCCCATC
CCGCAGTACA TGAACTACGC GCCGGGGTTC CAGGCGTCGT TTGAAAAGGC CGCCGTGCAG
CGGGCCGGCG GCACCATTGA GAAAAAATAG
 
Protein sequence
MKTSLEKYRE YGRRIEDLIR PATFPLAVKI VRPEDEIAPE YKRPFRDLGV QNFVCQNFKM 
ARTYGWTIAV TGADINCKLA RALYGWDTLT DQEREWAEDF SVGLYSKDRE TAGKFGRHLY
ALDEPFAGLI ISPLTRTKIV PDTVLVYCLP AQAMRFVQGY LFMEGGVLEF AAAGRVGSCH
EGVTKVLKTG RPQYVTLGNG DRVWGGAHDH EVMFACPAEK LDVLMEGLET THAAGLRYPI
PQYMNYAPGF QASFEKAAVQ RAGGTIEKK