Gene Dole_2552 details

Gene Information

• Locus tag: Dole_2552
• ID: 5695403
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: -
• Start bp: 3087898
• End bp: 3088593
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641265161
• Product: SNARE associated Golgi protein
• Protein accession: YP_001530433
• Protein GI: 158522563
• COG category: [S] Function unknown
• COG ID: [COG0398] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCCA GGATTTCCAA AGTCATGATC GGGCTGGTGA TCGCCGGACT GGTGGCTGTT 
TTTTTCGGAT TTGACCTCGG ACAGTACCTG AGTTTTGATT TTCTCAAATC CCGTCAATCC 
GCCCTGGCGA CCTTTTACGC GGAGCACCGG CTGATGACCA TGGCGATCTA TATGGCCGTT 
TATATTCTTG TGGCGGCGTT GTCGCTTCCC GGCGCGGCGG TCATGACCCT GGCCGGCGGA 
GCGATTTTCG GGTTCTGGAT CGGTCTTGTC CTGGTCTCTT TTGCCAGTTC CATCGGCGCG 
ACCCTGGCGT TTCTGGCGGC CCGGTTTTTG CTGAAGGATT ATGTGCAAAA CAGGTTCGGC 
AGCCGGCTGA AAACCGTGAA CCACGGCATT GAAAAAGACG GTGCCTTCTA TCTGTTCACA 
CTGCGCCTGG TTCCGGTTTT TCCGTTTTTT GTGATTAATC TGGTGATGGG ACTTACGCCC 
ATCCGGACCG GAGTGTTTTA TGCCGTCAGC CAGGTGGGCA TGCTGGCCGG TACCGCGGTT 
TATGTAAACG CCGGCACACA ACTGGGGCAG ATCGATTCGT TGTCCGGAAT CCTGTCACCC 
GGCCTTATTT TTTCTTTTGT GCTGCTGGGC ATTTTCCCGT TTATTGCGAA AAAAACAGCC 
ACCCTGATTC AGGCAAGAAA AGCACTGGTC AAATGA 

 

Protein sequence

MKSRISKVMI GLVIAGLVAV FFGFDLGQYL SFDFLKSRQS ALATFYAEHR LMTMAIYMAV 
YILVAALSLP GAAVMTLAGG AIFGFWIGLV LVSFASSIGA TLAFLAARFL LKDYVQNRFG 
SRLKTVNHGI EKDGAFYLFT LRLVPVFPFF VINLVMGLTP IRTGVFYAVS QVGMLAGTAV 
YVNAGTQLGQ IDSLSGILSP GLIFSFVLLG IFPFIAKKTA TLIQARKALV K