| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2545 |
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| Symbol | |
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| ID | 5695396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3079772 |
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| End bp | 3080899 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641265154 |
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| Product | HEAT repeat-containing PBS lyase |
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| Protein accession | YP_001530426 |
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| Protein GI | 158522556 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1600] Uncharacterized Fe-S protein |
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| TIGRFAM ID | [TIGR00276] iron-sulfur cluster binding protein, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00348974 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTTAC AACAGGAAGA GATCATCAAA AAAGCGCGGG AACTGGGGTT TGCCGACATC
GGTTTTACCA CGGCCGACCC TTTTGAGGAG CACCGACGAA TGCTGCTGGA ACGGCAGGAG
GAGTACGGAT GGGCCGAGCA GGTAGGCCTT GACCTGCTGA AAGGCACTGA TCCCGACGCC
ATCCTGCCGG GGGCAAAAAG CATCATCGTT CTGATCGAAA ACTATTTTTC CCACGCCTAT
CCCCGTTCCA TGGAGGGCAT TTTCGGCCGG TGCTACCTGG ATGACGACCG GGTCACAAAA
GACGGCCTGG TGCCGCGGAT AAAGGCCTTC CGCGCCTTTC TGCGGGAGGA CGGCATCAAC
ACCAAGGTGC CCTTTAACCT GCCCCACCGG GTGGCCGCGG CCCGGGCCGG ACTGGGCGAT
TTCGGCAGGA ACTGCCTCTT TTACGCTCAC AATGCCGTGC GCGGCGGCTC CTGGACCCTG
CCCATCGCCG TGGTGGTGGA TCGAGAATTT ACGCCGGGCA CGCCCACCCT GGGCATCGGA
TGCCCGGACT GGTGCAAGAA CGTCTGTATT GCCGCCTGCC CCACCGGCGC GCTCAAGGGC
AGTGGCAGAA TCGATCCCCG CAAATGCATC TCATTTCTCT CCTATTTCGG CGACGGCATC
ACGCCCCTCA AAATGAGGGA ACCCATGGGT ATGTTTGTCT ACGGGTGCGA CCGGTGCCAG
AATGTCTGCC CCCGCAACCA GCCCTGGCTG GCCCAGGCGC TGCCGGTAAA CGAACGGGCC
GCGGCCAAGG CGGAAAACTT CGACCTGCGG GCCCTGCTGC ACATGGACAC CGCTTATTTT
GAAAGCAGTG TATGGCCCCA CATGTTCTAC ATGTCATCCG CCGACATCTG GCGATGGAAG
ATGAACGTGG CCCGGGCCAT GGGCAACAGC CGGGACCAGG GCTTTGTTCC GGACCTGGCA
CGGGCGTTTG AAGAAAACGA GGACCCCCGC GTCAAGGGAA TGGCGGCCTG GGCACTGGGC
CACATCGGCG GCGATCAGGC CAAAACGGCC CTGGAAAAGT TTTCCGAAAC AACACTTGCC
GGTCCCGTGG CCGAAGAGGT TCGTCTGGCA ATGGATGCCT GCGCCTGA
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| Protein sequence | MMLQQEEIIK KARELGFADI GFTTADPFEE HRRMLLERQE EYGWAEQVGL DLLKGTDPDA
ILPGAKSIIV LIENYFSHAY PRSMEGIFGR CYLDDDRVTK DGLVPRIKAF RAFLREDGIN
TKVPFNLPHR VAAARAGLGD FGRNCLFYAH NAVRGGSWTL PIAVVVDREF TPGTPTLGIG
CPDWCKNVCI AACPTGALKG SGRIDPRKCI SFLSYFGDGI TPLKMREPMG MFVYGCDRCQ
NVCPRNQPWL AQALPVNERA AAKAENFDLR ALLHMDTAYF ESSVWPHMFY MSSADIWRWK
MNVARAMGNS RDQGFVPDLA RAFEENEDPR VKGMAAWALG HIGGDQAKTA LEKFSETTLA
GPVAEEVRLA MDACA
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