| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2497 |
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| Symbol | |
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| ID | 5695347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3025896 |
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| End bp | 3026822 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641265105 |
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| Product | integrase family protein |
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| Protein accession | YP_001530378 |
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| Protein GI | 158522508 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCCAAGG ACCACGGGGC ATACCCGGCA AAGCCGCTGG CCGACGCGTT TGTTGAATCC
CTGGCATCGG AAAAAGGCTA TTCGCCCAAC ACGTGCCGGG CCTACAGCGC CGACCTGAAG
GAGTTTCTGG CGTTTCTGTC CCCCCCGGAC GACACAGAGC ACCCGGTGTG TCTGGACGAC
ATCTCGGTGA TCGCCATCCG CGGCTACCTG GCGTTTCTCC ACAAGAAAAA GATGGATAAA
AGCACGGTTT CCCGCAAGCT CTCCGTGCTG CGCTCCTTTT TTCGATACCT GGAAAAACGG
GGCATAATGA CGGGAAACCC GGCCAGGGCC GTGTTGTCGC CCAAAATCGG GCGAAAGATT
CCGGCCTTTC TCTCCGTGGA CGACATGTTC CGGCTGCTGG ACGCCAGCAC CGGAGACACG
CTGCTGGACC TGCGCAACCG GGCGATTTTC GAGACCATCT ATTCAACGGG GATACGGGTG
TCTGAAGCGG CGGGTCTGGA CGCGGCCCAC GTGGAAACAG ACGAAAGGGT GTTCCGGGTT
TACGGCAAGG GCGCAAAGGA GCGGGTGGTG CCGGTGGGCA AAAAAGCCCT GGCCTCGATT
GCCGCTTACC GCACCCGGCT GTTTGAAGAG ACCGGCATCG GCGTAGAGGA AGGCCCCCTG
TTTTTGAACA AAAACCGGGG GCGGCTGACC ACCCGTTCCA TGGACCGGAT TTTAAAACAG
ACGGCCCTTC GGTGCGGGTT GACGGTTTCC CTGTCGCCGC ACGCGTTGCG CCACTCCTTT
GCCACGCACA TGCTGGACGC CGGCGCCGAC CTGAGAACCG TCCAGGAGAT TCTGGGCCAC
AAGAGCCTGT CCACCACACA GAAATACACC CATGTGTCCA TGGATAAACT GATGGAGGTT
TATGATCATG CCCACCCACG CAAATAG
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| Protein sequence | MSKDHGAYPA KPLADAFVES LASEKGYSPN TCRAYSADLK EFLAFLSPPD DTEHPVCLDD
ISVIAIRGYL AFLHKKKMDK STVSRKLSVL RSFFRYLEKR GIMTGNPARA VLSPKIGRKI
PAFLSVDDMF RLLDASTGDT LLDLRNRAIF ETIYSTGIRV SEAAGLDAAH VETDERVFRV
YGKGAKERVV PVGKKALASI AAYRTRLFEE TGIGVEEGPL FLNKNRGRLT TRSMDRILKQ
TALRCGLTVS LSPHALRHSF ATHMLDAGAD LRTVQEILGH KSLSTTQKYT HVSMDKLMEV
YDHAHPRK
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