Gene Dole_2473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2473 
Symbol 
ID5695322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2999088 
End bp3000494 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content57% 
IMG OID641265080 
Productradical SAM domain-containing protein 
Protein accessionYP_001530354 
Protein GI158522484 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0785227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGCC CGACCAGGGT ACTGCTGATC AAGCCCTATA CAAATGTTCG GCCCGCCATC 
GTTGATGTGC CCATCGGCCC CCTGTACCTG CTCTCCTATC TGCGGCATCA TCTTGCCGGC
GCCGTGGATA CGAAATTTAT CGACCTGCGC CTCTCCCGGC ATCGCCGGGC CGAACTGGTC
TCCATGCTGA CCGGTTTTTC TCCACAGGTG GTGGGCATCA GCCTGCTGAC CTTTAACCGC
GCGTTTCTGG ATACCTATCT TCCCGTGATC CGTGCCCATG CGCCCGGCGC CCTTATCGTT
GTGGGCGGCC CCTATGCCAC CTACCATTAT GCCGATATTC TGGACCGGCA CCGGGAGGTG
GATGTAGCGG TTATCGGCGA GGGCGAGCGG GTTTTTTTAA ATCTCGTGCG AACCGTGATT
GAGGAGGGGG ATGTTCAGTC GGTAAAGGGT ATTGCCTGCC GGGGAGCCGA CGCCGTGGCG
TGCAATGAAA GAGAGCCCTA TATCGAAGAT CTGGATGCCG TTCCTTTCCC CGATTATGAG
GCGATCGACA TTCGGCGCTA CTGGGGAAAC CACCCGGAGA TGAACGGCGT GCTGGCAAAA
AAGGCCTACA CCCATATCAT CAGCTCCCGT GCCTGCCCCT ATCACTGTGT CTACTGTCAC
AACATTTTTG GCAAGAAAGT CCGCAAGCGG TCGCCTGAAA ATTTTGTGGT CGAGATCGAA
CTGCTCTACC ATCAATACGG GGTCCGGGAG TTTCAGATCA TCGACGATAT TTTCAATATC
GACCGGCCCC GCATGCACGA CATTCTGCGC CGCATTATGT CCAGTGGCAT GAAGATCAAA
ATCGCCTTTC CCAACGGGCT TCGCGGCGAC CTGCTTACCC ATGAGGACAT TGATCTGCTT
CAGGCGGCCG GTGCCTACAT GATCACCCTG GCCATTGAGA CGGCCTCGGT CCGCATGCAG
AAAATTATTC GAAAACATCT CGATATTCCC AGGGTGATGG ACAACATCGC CTATGCTGCC
AGCCGGGGAC TGATCGTCAA GGGGTATTTC ATGATTGGTT TTCCCGGAGA AACCGTGGAA
GAGATGAAGC AGACCATTGA CCTGGCGGTG AAATCAAAGC TGGACCTGGC CCATTTTTTC
ACGGTGATTC CCTTTGAAGG CACCGAGCTG GCTGAGATGG CCCGCGCCCT TTATCCCGAC
GTCGGCCGGG AGGTGGCCAC CCATTACCTG CCGGCCCGGC CCTTTTACCA GGAGGCCACG
GGGTACAACC TGAACCGGCT CCAGAAAACC GCCTATCTGC GGTTTTACGG ATCGCTTCGA
ACGGTCCGGA CCTTTTTAAA AATACCCAGA AAACTTCATC GTCTTCAGCG GTGGGCCGCC
TTTGCCCTGG ACGTGTTCCG CGCGTAG
 
Protein sequence
MDGPTRVLLI KPYTNVRPAI VDVPIGPLYL LSYLRHHLAG AVDTKFIDLR LSRHRRAELV 
SMLTGFSPQV VGISLLTFNR AFLDTYLPVI RAHAPGALIV VGGPYATYHY ADILDRHREV
DVAVIGEGER VFLNLVRTVI EEGDVQSVKG IACRGADAVA CNEREPYIED LDAVPFPDYE
AIDIRRYWGN HPEMNGVLAK KAYTHIISSR ACPYHCVYCH NIFGKKVRKR SPENFVVEIE
LLYHQYGVRE FQIIDDIFNI DRPRMHDILR RIMSSGMKIK IAFPNGLRGD LLTHEDIDLL
QAAGAYMITL AIETASVRMQ KIIRKHLDIP RVMDNIAYAA SRGLIVKGYF MIGFPGETVE
EMKQTIDLAV KSKLDLAHFF TVIPFEGTEL AEMARALYPD VGREVATHYL PARPFYQEAT
GYNLNRLQKT AYLRFYGSLR TVRTFLKIPR KLHRLQRWAA FALDVFRA