Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2473 |
Symbol | |
ID | 5695322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2999088 |
End bp | 3000494 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641265080 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001530354 |
Protein GI | 158522484 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0785227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACGGCC CGACCAGGGT ACTGCTGATC AAGCCCTATA CAAATGTTCG GCCCGCCATC GTTGATGTGC CCATCGGCCC CCTGTACCTG CTCTCCTATC TGCGGCATCA TCTTGCCGGC GCCGTGGATA CGAAATTTAT CGACCTGCGC CTCTCCCGGC ATCGCCGGGC CGAACTGGTC TCCATGCTGA CCGGTTTTTC TCCACAGGTG GTGGGCATCA GCCTGCTGAC CTTTAACCGC GCGTTTCTGG ATACCTATCT TCCCGTGATC CGTGCCCATG CGCCCGGCGC CCTTATCGTT GTGGGCGGCC CCTATGCCAC CTACCATTAT GCCGATATTC TGGACCGGCA CCGGGAGGTG GATGTAGCGG TTATCGGCGA GGGCGAGCGG GTTTTTTTAA ATCTCGTGCG AACCGTGATT GAGGAGGGGG ATGTTCAGTC GGTAAAGGGT ATTGCCTGCC GGGGAGCCGA CGCCGTGGCG TGCAATGAAA GAGAGCCCTA TATCGAAGAT CTGGATGCCG TTCCTTTCCC CGATTATGAG GCGATCGACA TTCGGCGCTA CTGGGGAAAC CACCCGGAGA TGAACGGCGT GCTGGCAAAA AAGGCCTACA CCCATATCAT CAGCTCCCGT GCCTGCCCCT ATCACTGTGT CTACTGTCAC AACATTTTTG GCAAGAAAGT CCGCAAGCGG TCGCCTGAAA ATTTTGTGGT CGAGATCGAA CTGCTCTACC ATCAATACGG GGTCCGGGAG TTTCAGATCA TCGACGATAT TTTCAATATC GACCGGCCCC GCATGCACGA CATTCTGCGC CGCATTATGT CCAGTGGCAT GAAGATCAAA ATCGCCTTTC CCAACGGGCT TCGCGGCGAC CTGCTTACCC ATGAGGACAT TGATCTGCTT CAGGCGGCCG GTGCCTACAT GATCACCCTG GCCATTGAGA CGGCCTCGGT CCGCATGCAG AAAATTATTC GAAAACATCT CGATATTCCC AGGGTGATGG ACAACATCGC CTATGCTGCC AGCCGGGGAC TGATCGTCAA GGGGTATTTC ATGATTGGTT TTCCCGGAGA AACCGTGGAA GAGATGAAGC AGACCATTGA CCTGGCGGTG AAATCAAAGC TGGACCTGGC CCATTTTTTC ACGGTGATTC CCTTTGAAGG CACCGAGCTG GCTGAGATGG CCCGCGCCCT TTATCCCGAC GTCGGCCGGG AGGTGGCCAC CCATTACCTG CCGGCCCGGC CCTTTTACCA GGAGGCCACG GGGTACAACC TGAACCGGCT CCAGAAAACC GCCTATCTGC GGTTTTACGG ATCGCTTCGA ACGGTCCGGA CCTTTTTAAA AATACCCAGA AAACTTCATC GTCTTCAGCG GTGGGCCGCC TTTGCCCTGG ACGTGTTCCG CGCGTAG
|
Protein sequence | MDGPTRVLLI KPYTNVRPAI VDVPIGPLYL LSYLRHHLAG AVDTKFIDLR LSRHRRAELV SMLTGFSPQV VGISLLTFNR AFLDTYLPVI RAHAPGALIV VGGPYATYHY ADILDRHREV DVAVIGEGER VFLNLVRTVI EEGDVQSVKG IACRGADAVA CNEREPYIED LDAVPFPDYE AIDIRRYWGN HPEMNGVLAK KAYTHIISSR ACPYHCVYCH NIFGKKVRKR SPENFVVEIE LLYHQYGVRE FQIIDDIFNI DRPRMHDILR RIMSSGMKIK IAFPNGLRGD LLTHEDIDLL QAAGAYMITL AIETASVRMQ KIIRKHLDIP RVMDNIAYAA SRGLIVKGYF MIGFPGETVE EMKQTIDLAV KSKLDLAHFF TVIPFEGTEL AEMARALYPD VGREVATHYL PARPFYQEAT GYNLNRLQKT AYLRFYGSLR TVRTFLKIPR KLHRLQRWAA FALDVFRA
|
| |