| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2424 |
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| Symbol | |
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| ID | 5695272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2926088 |
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| End bp | 2927830 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641265030 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001530305 |
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| Protein GI | 158522435 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000593134 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACTTT TCCCGCAGAT AAAAAAAGCC TTTGTGCCGG CCGTTCTGGC CTGCGCCGCG
GTTCTGGCGG CAGGCCATTC ACGGACGGCT CAGGCCGCCT TTTTTGAAAA TATCGCGGTT
CACGCAAAGG CCATCTCCCT GGCCAATTCA TGCACCGCCT ATCCGCCGGG CATCATGGCC
ATTCACTACA ACCCGGCGGG TCTTTCCAGC ATGCACGACG GCCAGCAGGT GAGCATGGGC
CTGGTGACCG CCGAATTCGC CCTGGAGTCG CGGTTTGACC AGGACCCTGA GTTTCAGGAC
TGGCTGGGCG GCAGTTTTGA CAATGCGGAT GACCCGGTCT CCGGACACAC CGGCACCACC
CAGGGTGTGC ACATGTATGT GCCCATGGTA GGAGATCAGG ACACCGACGC CATCGGCCTG
GAAACCCCCC TGGGGTTCAC CCTGGCCGCG GCCCCCTTTC CCCTGGGGGT CTCCTACAGA
AAACCCGGTT CGCGGTGGAC GTTCGCCTTT GGCGCCTACG CCCCCTCCCT GGGCGGTTAT
TCCCGAAGCA ATGACGACCC GGCCCGCTAC CTGGGCAGGG CGGTTTCCAT GCAGCACATT
GTCTATGCGG CGCCTTCCGT CAGCTACAGG ATCACCGACA CCCTTTCCCT GGGCCTGACC
ATCGGCATGG GCCAGTCCGC CACCTATATC GACATGGACA TGCGCATGCC CAACGACCTG
ATGGCTCTGA CCAAAATTCT CGGCGAGGTC ACGGAAGGTC TTGACATTCC CATCATCTCG
GCCCTGACCC TGCCGCCCCC CTGGTTCGGC GGCGGCATCG GCCCCTACGA GGATATCGCC
AACCTTCAAC TAAGCGCTCG GGACGACTAC TGCCCCAACT ACAACCTGGG CCTGCTGTGG
GAGCCCAAGA ACTGGTTTTC CTTTGGTCTC TGTTATCAAA GCGAAGTCAA GATGGAACAG
GACGGCACCT ACCGGTTTAC GTATAATGAA AATTTTCAAC GCATGAGCGC CTGGTTCGGC
AGCTCTCCGC TGCTGCTGCC TTTTTCAATT ATTCTGGACC TGCCCTACGA GGCCCTTCCT
TACCAGACCG GGCATATGGT ATTGGAAGGT GTGGATGCCC CTCAGCGGGT CCAGGCCGGC
ATTATGCTGC GGCCCTTCAA GCGGCTTCGG CTGATGTGCG ACGCCCACTG GATCGACTAC
TCCAAGACCA AGGCCTACAC CCTCCATTTT GACCAGAAGA TTCAGCCGTT CCAGATCGCC
AAGTTTGTGG GCCACACCGA TGGCGCCTAT GCGCTCAAGA TGACGCGAAA CATGGAAGAC
GAAATCCACA TGAGCTACGG CGCCGAGCTC CAAGTCCTGG AGTGGCTCTC CCTGCGGTGC
GGCTATGAGG AGAGAAAAAC ATCGGTCAAC CCCCTCTACT TTGACGTCAT GGCCCCGGTT
CCTGACCTGG ACTTCTACGG CGCGGGCATC GGCATTCAGC TCAAGGACGG CATGGCCATC
GACCTTGCCT TCGGCTACCT GAAATCAGAC ACCTGGCATG TGCCCAACAA CACCAGCAAA
AGCATGAACT CAACCGCTTT CACCGATGCG GTGTACAACC CCTACGCGGG CCTGGACGTC
TCCGGAAAAA TGGATGCCAC CGTCATCGCG GCCAACTTTT CCATGCCCTT CAAATACGTT
TACAAGCTGG GCAACATGCT CCAGGCGGCC TATGAGCAGA CAAAGGAGAA AATGTCTTTC
TAA
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| Protein sequence | MRLFPQIKKA FVPAVLACAA VLAAGHSRTA QAAFFENIAV HAKAISLANS CTAYPPGIMA
IHYNPAGLSS MHDGQQVSMG LVTAEFALES RFDQDPEFQD WLGGSFDNAD DPVSGHTGTT
QGVHMYVPMV GDQDTDAIGL ETPLGFTLAA APFPLGVSYR KPGSRWTFAF GAYAPSLGGY
SRSNDDPARY LGRAVSMQHI VYAAPSVSYR ITDTLSLGLT IGMGQSATYI DMDMRMPNDL
MALTKILGEV TEGLDIPIIS ALTLPPPWFG GGIGPYEDIA NLQLSARDDY CPNYNLGLLW
EPKNWFSFGL CYQSEVKMEQ DGTYRFTYNE NFQRMSAWFG SSPLLLPFSI ILDLPYEALP
YQTGHMVLEG VDAPQRVQAG IMLRPFKRLR LMCDAHWIDY SKTKAYTLHF DQKIQPFQIA
KFVGHTDGAY ALKMTRNMED EIHMSYGAEL QVLEWLSLRC GYEERKTSVN PLYFDVMAPV
PDLDFYGAGI GIQLKDGMAI DLAFGYLKSD TWHVPNNTSK SMNSTAFTDA VYNPYAGLDV
SGKMDATVIA ANFSMPFKYV YKLGNMLQAA YEQTKEKMSF
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