| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2404 |
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| Symbol | |
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| ID | 5695252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2894699 |
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| End bp | 2896000 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641265010 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001530285 |
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| Protein GI | 158522415 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCA CCCAGCATTA CGACGCCATT ATCGTCGGGT CAGGCCCCGG CGGGGCAACC
GTGGCCAGGG AACTGACAAA GCAGGGCAAA AAGGTCCTGA TTCTGGAATG GGGCAGCAAC
GCGCCGATAA AGGGGTCCAT GTTCCAGATG GCCCTGAATG CCGGCATGCC CGGCAAAAGC
GTGCTGTTTA CCAACAAAAA GATGCTGGCC ATGGTGAGAG GGATCTGCAC CGGCGGCAGT
TCTGTTTTTT ACTGCGGTAC CGCCTTTGAT CCGCCGTATG AAATGATGCG GTCCCACGGC
ATTGAACTTG AAGAGGAAAC GGCGGCGTTA AAAAAGGAGC TGCCTATTGC CCCGGCCGGT
GACGCCATTT TCGGCCCGGG CGCCCGCCGC ATGATGGAAA GCGCCCAGGA AATGGGCTAT
GACTGGAAGC CACTCAACAA GTTCATCTAC CAGGACAAGT GCAAGCCCGA CTGCTGGAAG
TGCAGTTACG GATGCCCGGA AGGTGCCAAG TGGAGCGCCC GCATGTTCGT GGAAGAGGCC
GTCACCGATG GCGCTGAACT GATCAACGGC GCAAAGGTGA CCCGGGTGCT GTTTGACGGC
AACACCGCCA CCGGCGTGGA ATACAAAAAG AACCTGGGCA CCCACAAGGT CACCGCCGAC
CGGGTCGTCA TCTCCGCCGG CGGGGTGGGG TCTCCCACCA TTCTCCGGGC CAGCGGCATT
TCCCGGGCCG GCTACGACTT TTTCTTTGAC CCCCTGATCA TGGTATTCGG CACGGTAAAA
AACCTCAAGG GCAAAGGCGA AATCCAGATG GCGGCCGGTG CCCACATGGC CGACGAGGGG
TACCTGATGG TGGACCTGGA TTTTCCCTGG CCCATGTACA TGGTGCAGAG CGCGCCCAAG
CTGCGGCTGC ACAAACTTCT CTCCAGGCGC GATACCCTGA TGCTGATGAT CAAGATCAAG
GATGACCTGG GGGGCCGCAT CACCGACGGC GGTGGGGTCC GCAAGGACAT CACGAAAAAC
GACAAGGCCA AACTGCAAAA AGGATATGAA CGGGCAAAAG GCATTCTGCA GAACGCCGGA
GCTAAAGGGG TGTTTTCCGG CTGGACCGTG GCGGCCCACC CCGGCGGCAC GGTCAAGATC
GGTGACGTGG TGGATTCGAA CCTGAAAACC GAAAAGGAGA ATCTCTACGT GTGCGACTGT
TCGGTGATGC CGGATGCCTG GGGCATTCCC CCCACCCTCA CCCTGCTGGC CCTGGGTAAG
CGGCTGGCAA AGCATTTGGG AGAGGAAATG GACGCAAAAT AA
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| Protein sequence | MNTTQHYDAI IVGSGPGGAT VARELTKQGK KVLILEWGSN APIKGSMFQM ALNAGMPGKS
VLFTNKKMLA MVRGICTGGS SVFYCGTAFD PPYEMMRSHG IELEEETAAL KKELPIAPAG
DAIFGPGARR MMESAQEMGY DWKPLNKFIY QDKCKPDCWK CSYGCPEGAK WSARMFVEEA
VTDGAELING AKVTRVLFDG NTATGVEYKK NLGTHKVTAD RVVISAGGVG SPTILRASGI
SRAGYDFFFD PLIMVFGTVK NLKGKGEIQM AAGAHMADEG YLMVDLDFPW PMYMVQSAPK
LRLHKLLSRR DTLMLMIKIK DDLGGRITDG GGVRKDITKN DKAKLQKGYE RAKGILQNAG
AKGVFSGWTV AAHPGGTVKI GDVVDSNLKT EKENLYVCDC SVMPDAWGIP PTLTLLALGK
RLAKHLGEEM DAK
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