| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2399 |
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| Symbol | |
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| ID | 5695247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2889799 |
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| End bp | 2891625 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641265005 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001530280 |
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| Protein GI | 158522410 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.9987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCAT TGACCCTTGA CATGATCCTG GTGATGGCCA TGATCGGCCT GGCGGTTTTT
CTGTTTATCG TGGAGTGGGT GAGAGTGGAC GTGGTGGCGA TTCTGATGAC CGTGGCCCTG
CCCCTGCTGG GCCTGGTGAC GCCCAAGGAG GCCTTTGTGG GGTTCAGCAG CAACGCCGTT
ATCTCCATCA TCGCGGTGAT CATCATCGGC GCGGGCCTGG ACCGCACCGG CATGATCAAT
AAACTGGTGA CCCCGGTGCT GCGTATTGCC GGTAACAGCA CTTCCCGGAT CATTGTCGCC
ATTTCCGTTA CCGTGGCGAT TATCTCCAGT TTCATGCAGA ACATCGGGGC CGCCGCGCTT
TTTCTGCCCG CCATTCAGCG CATCAGCAAG ATGCAGAACA TCCCCCTGGG CCGGTTGCTC
ATGCCCATCG GGTTTTCCGC CATTCTGGGC GGTACCGTCA CCCTGGTGGG TTCCAGCCCG
CTGATCCTTC TAAATGACCT GCTGGTGCCT TTCAACCTGG AGCCCTTCGG CCTGTTCGAC
GTCACGCCCA TCGGCCTGGC CCTGGTGGCC GGCGGCATTG CCTGTTTTGT GTTGCTGGGC
CGGTTCATTC TGCCCCAGGG GGCGGCCGTG AATGCTCCAG ACCCGGACGC CTCGGAAACC
GGTGTCCCTT CTTTGCCCGG CGGTCCGGAT CCGGATGGGA CCGAATTTTA TGAACTGCGG
ACCCCGGATG ATTTTACCGA TTACCGGGAT CCGCTTTTTG TGGAGGACAT TCGGCGGCGA
TACCTGCTCA ACGTGGTGGC CCTGACCGAA CCGCCCGACT ACAAGGTGCT TTCCCCCGCG
CCGGACGCCG AGGTGCGGGC GGGCATTGAT CTGGTGGTCT GCGGCCGAAA AGCGGATGCC
GAACGGATGG CGTCCGCCGA AGGCATGCGG CTCAAGGCGG CCCTTGAAAC CTACCGGGAC
CGGCTGGCGG TTGAAACCGC CGGAACGGTG GAGGTGGTGG TGGCCCCCCG GTCTTCCTAT
GCCGGAAAGG CCCTGCAGGA CATCAACTTC CAGGACCGGT TTCATGTCAC ACCGTTGAGT
GTGTACCGGC AGGAGGAGAC CTACCGGGCC CGGCTGGACG ATATCGTTTT GCAGGTGGGC
GACGTGGTGG CCCTTTACGG CACATGGAAA CGGCTGAAGA CCCTGCAGAA GGAGGGCGGG
CTGCTCTTTT CCCTGCCGTC GGACATGGAG GACCTGCGGC CGGAAAAGGC CGTGTGGGCC
GGGCTGTGGC TGGTGGTGGC CCTGACCATG ATCATGGGGT TCAAGGTTCA GCTGTCAGTG
GCCCTGATGA CCGGCGCCCT GGGAATGGTG CTGACCCAGG TCCTGAGCAT CGACGAGGCT
TACCAGTCGG TGGACTGGCG CACCATCTTC CTGCTGGCCG GCCTGATTCC CCTGGGCATT
GCCACGGAAA AAACCGGCAC CGCCGCCTGG ATCGCCCACA CCCTCCTCGG CATTATCGGT
GATGTGTCCC CCATTGTGCT GCTGTCGGTG ATCGGTATTC TTTCCACCCT GTTCACCCTG
GTGATCTCCA ATGTGGGGGC CACGGTGCTG CTGGTGCCCC TTGTGGTGAA CATGGCCATC
GCGGCCCACA CGGACCCCCG CATGGCGGCC CTGGTGGTGG GGCTGGCTAC CAGCAATTCG
TTCGTGCTGC CCACCCACCA GGTCAACGCC CTTTACATGG GGCCGGGCCA CTATCGCACG
GTGGATTTCA TCAAGGCCGG GTCCCTGGTC AGCGTGGTTT TCCTGGTGGT GATGATTGCG
GCCATCAGCC TGATTTACGG AATATGA
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| Protein sequence | MDALTLDMIL VMAMIGLAVF LFIVEWVRVD VVAILMTVAL PLLGLVTPKE AFVGFSSNAV
ISIIAVIIIG AGLDRTGMIN KLVTPVLRIA GNSTSRIIVA ISVTVAIISS FMQNIGAAAL
FLPAIQRISK MQNIPLGRLL MPIGFSAILG GTVTLVGSSP LILLNDLLVP FNLEPFGLFD
VTPIGLALVA GGIACFVLLG RFILPQGAAV NAPDPDASET GVPSLPGGPD PDGTEFYELR
TPDDFTDYRD PLFVEDIRRR YLLNVVALTE PPDYKVLSPA PDAEVRAGID LVVCGRKADA
ERMASAEGMR LKAALETYRD RLAVETAGTV EVVVAPRSSY AGKALQDINF QDRFHVTPLS
VYRQEETYRA RLDDIVLQVG DVVALYGTWK RLKTLQKEGG LLFSLPSDME DLRPEKAVWA
GLWLVVALTM IMGFKVQLSV ALMTGALGMV LTQVLSIDEA YQSVDWRTIF LLAGLIPLGI
ATEKTGTAAW IAHTLLGIIG DVSPIVLLSV IGILSTLFTL VISNVGATVL LVPLVVNMAI
AAHTDPRMAA LVVGLATSNS FVLPTHQVNA LYMGPGHYRT VDFIKAGSLV SVVFLVVMIA
AISLIYGI
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