Gene Dole_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2388 
Symbol 
ID5695236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2878373 
End bp2879782 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content53% 
IMG OID641264994 
Producthypothetical protein 
Protein accessionYP_001530269 
Protein GI158522399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTCAT TGCGTTTGTT TGCCCAATTC GAAACCTGTG GTGATCAATT GCCAGTGACC 
GGAGATTTTC CAAATCGGAG GCTGAACAGT CGGTTTTTCC GGGTGCTCTG CCTTCTGTCT
GGCCCGGCTG TTCTTTTCTT TTTTATTAAT GGGGTTAAAG CCCTATGGCT TTCGTTTCTG
CCACCCTACA TTTTTATGAA GGACATGGTT CAGGATTGGT TGCTGGCCAA AGCTCTGCTG
GCCGGCATTT CTCCCTATGA CCCGTTACCG GTGCTGGCGG CCCGTTTCCT GGGCCCCTGG
TCGGAATTTG TTATCCTTCG TCATCCATCG CCCCACCCCC CCATTGCCGC TATTGCTGCC
CTCCCTCTGG GACTGCTGTC CTGCCGGGAG GCGGCGTTTG TCTGGCTGGG TTTCGAGTTG
ATGTGTATTG GTGTTTCCGT TTACCTGGTA CTTAAATGGT GGGGGGGGGC TTCACTTGGA
TGGGCCACGG GCCTGACCAT ATTGCTGATC GCATGGGCCC CTTTTGGAGA AGGGCTGCTG
TTTGGGCAGA GCAACACACT GGTGCTGTTG TTGTTGATAT GTGCCTGGCA AACAGAAAGA
CAATGGTTAT GTGGTGTTTT TATCGGGTGT TCATTGGCAA TAAAATTTAT GGGCTGGCCC
ATCCTGCTGT TCTGTCTGCT GCGCAAAAAA TGGCGGGTCG TCGGCACCGC CTTTGCGGTG
TTGATTGCGG GACACATGGC CGCTGTTCTG GTGATGGAGG CAGATTCGGT CCGGCTTTAC
TACAGCAAGG TCATCGGCAG CGTGGACGCG ATTTATCGGT TCGCCGATGG TAATTTTTCC
GTCTGGTCTC TGGGCTGGCG TATGTTCGTG GGGATCAGCG GCCCCTTTAA ACAGAGCATC
AACATTTTAC CTCTTTTTGC AAACGCCCCA ATGGCCATGC CCGTTTCCTT TTTTCTAACA
GTTGTCTTTG TGGCGGGGGG GATGCTTCTT GCCCTGAAAA GACGGGACTC TGATGTCGCC
TGGGCGCTGT TGTTTTGTCT GAGTGCCGTC ACCGGCCCTA TCTCCTGGAT ACACTATCTG
GTTTTGCTGC TTCCACCTGC GGCTGTGATA CTCAAGCGCA TCATGCGGCT CGGGTTCCCC
CTGGGGCAGA CGGCCATATG GTTTTTGCTG ATACTGTTGC TGCTTGTTCC AGATTCAATG
TTGAACGGGC TTGCCGCTTT TTTTGATTTA CAACCCTCCG GTTTCGGCCC GGTGACGGTT
TCTTTCTGGG CCGGTCTGTT AACCCTGATA CCACTGGCTG TTACCCTGGG AATGATGGCG
TTTGTCTATC AGACGGGGAA AACGATGCCT CCAGGTTTCT GCTCCCCCGG AATGCCACGG
GAAGGTAAAG GGGCACGGTA TTATGATTAA
 
Protein sequence
MLSLRLFAQF ETCGDQLPVT GDFPNRRLNS RFFRVLCLLS GPAVLFFFIN GVKALWLSFL 
PPYIFMKDMV QDWLLAKALL AGISPYDPLP VLAARFLGPW SEFVILRHPS PHPPIAAIAA
LPLGLLSCRE AAFVWLGFEL MCIGVSVYLV LKWWGGASLG WATGLTILLI AWAPFGEGLL
FGQSNTLVLL LLICAWQTER QWLCGVFIGC SLAIKFMGWP ILLFCLLRKK WRVVGTAFAV
LIAGHMAAVL VMEADSVRLY YSKVIGSVDA IYRFADGNFS VWSLGWRMFV GISGPFKQSI
NILPLFANAP MAMPVSFFLT VVFVAGGMLL ALKRRDSDVA WALLFCLSAV TGPISWIHYL
VLLLPPAAVI LKRIMRLGFP LGQTAIWFLL ILLLLVPDSM LNGLAAFFDL QPSGFGPVTV
SFWAGLLTLI PLAVTLGMMA FVYQTGKTMP PGFCSPGMPR EGKGARYYD