| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2368 |
|---|
| Symbol | |
|---|
| ID | 5695216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2852753 |
|---|
| End bp | 2853748 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641264974 |
|---|
| Product | nuclease |
|---|
| Protein accession | YP_001530249 |
|---|
| Protein GI | 158522379 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.712481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCC GGTTTTCAGA ACACACGATC CCGCTGGCTG ATATAGACAT GGAAGACCGG
TCGTTTCGCA TTACCACGGA CGCGGACAAG CCCATGGCCC CGCTGGTTGC CTCCCTGTCA
GCGGTGGGCC TGCTGTCGCC GCCGCTTCTC CGGCCCGCGA AGAAAAACGG TTTCCAGGTG
ATTTCCGGAT TTCGCCGACT GACCGCGCTC CGGCACCTGG GTGTTGTATC AGCATCCTGC
CGTGTGGTTG AGGGCGAGGC GGACCGGCTG ATCTGCCAGA AGCTGGCAGT GGCGGATAAT
CTCTGCTCCC GGCCCCTCAA CCTGGTGGAG CAGGCCCTGG CCGTGGAGAA GCTGTTCGGC
CTGGAAAAAG AGATGGACCG GCTGTGTGCC GTTCTTTCCG ACCTGGGAAT GGCCGCCAAT
CCCACACTTG TTGAAAAGCT CCGGACCCTT TTAAGCTTGC CCGAGCCGGT GCTGGACCAC
GTGGCCCGGG AGACCATTCC CCTTTCTTCC GCCCTTCTGC TGGCCGGCAT GAACGGGCCG
GATGCCCAAA TTCTTGCCGG GGTGTTTGCC AACCTTCGGC TGGGGGCCAA CAAGCAGCGG
GAGGTCGCGG TTCTGGCCCG GGAGATCGCC GTCCGGGAGG GGATATCCGT TGCCGACCTG
TTTGCTCAGG ACAAAACGCT TCACGGAATA TTAAACGATA CCGATGCCGA CCGGGGGCTT
CAGGCGGCCC GGTTGCGCGC ATTCCTTGAA AAGCGGCGGT TCCCGGCCCT GGTGCAAAGC
CGGGAGCGTT ACCAGGAGCT GGAAAAGCGG CTGAAACTCG GTCGCCGGGT TCGGCTTTGT
CCGCCGTCCT TTTTTGAAGG CGCCGATTTT GTGCTGGAGC TGACCTTTTC CGGCATGGAA
GAGTTCCGGC GCCATGCGGC CCTTGTGAAC CGGCTGAAGG AGGACAGGAC CCTGGAAGCC
ATTCTTTCCC GTTCCGGGGA TATGGATGAT GTGTAA
|
|---|
| Protein sequence | MSIRFSEHTI PLADIDMEDR SFRITTDADK PMAPLVASLS AVGLLSPPLL RPAKKNGFQV
ISGFRRLTAL RHLGVVSASC RVVEGEADRL ICQKLAVADN LCSRPLNLVE QALAVEKLFG
LEKEMDRLCA VLSDLGMAAN PTLVEKLRTL LSLPEPVLDH VARETIPLSS ALLLAGMNGP
DAQILAGVFA NLRLGANKQR EVAVLAREIA VREGISVADL FAQDKTLHGI LNDTDADRGL
QAARLRAFLE KRRFPALVQS RERYQELEKR LKLGRRVRLC PPSFFEGADF VLELTFSGME
EFRRHAALVN RLKEDRTLEA ILSRSGDMDD V
|
|---|
| |