| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2286 |
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| Symbol | |
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| ID | 5695134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2768045 |
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| End bp | 2772799 |
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| Gene Length | 4755 bp |
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| Protein Length | 1584 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641264892 |
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| Product | YadA domain-containing protein |
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| Protein accession | YP_001530167 |
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| Protein GI | 158522297 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0535407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT GGCAAAGGTT TTTTAACCTG CCCGCCATGC TGCTTCTGGC CGTTTTAGTT
GTAAACGGCA TGAGCGGCGC GGCATGGGCG GCGGATTTGG GTGTACTGTT AGATGGTAGT
GTCGTCAGCG GTACCCTGTC CGTGGACGAT ACGACTAACG CTGTGACCGT GGGCGGCAGC
CTGACTGCCA GCGGTACGGT ATCTGCCGGC AGCCTGTCGG TTACAGGCAC GGTAGCGGCC
GGAACGCTTG ACGTGACCGG TGACGCCGAT GTGGGTGGTG CCCTGACCGT TACCGGCACA
GCCACGACCA ACGGCATAGA CAACACAGGC GATGTGGCCA CGACCAGCCT GACCGCGACC
GGAACGGTAG CGGCCGGAAC GCTTGACGTG ACCGGTGACG CCGATGTGGG TGGTGCCCTG
ACCGTTACCG GCACAGCCAC GACCAACGGC ATAGACAACA CAGGCGATGT GGCCACGACC
AGCCTGACCG CGACCGGAAC GGTAGCGGCC GGAACGCTTG ACGTGACCGG TGACGCCGAT
GTGGGCGGTG CCCTGACCGT TACCGGCACA GCCACGACCA ACAGCATAGA CAACACGGGC
GATGTGGCCA CGACCAGCCT GACCGCAACC GGAACGGTAG CGGCCGGAAC GCTTGACGTG
ACCGGTGACG CCGATGTGGG CGGTGCCCTG ACCGTTACCG GCACAGCCAC GACCAACGGC
ATAGACAACA CGGGCGATGT GGCCACGACC AGCCTGACCG CAACCGGAAC GGTAGCGGCC
GGAACGCTTG ACGTGACCGG TGACGCCGAT GTGGGCGGTG CCCTGACCGT TACCGGCACA
GCCACGACCA ACGGCATAGA CAACACAGGC GATGTGGCCA CGACCAGCCT GACCGCGACC
GGAACGGTAG CGGCCGGAAC GCTTGACGTG ACCGGTGACG CCGATGTGGG CGGTGCCCTG
ACCGTTACCG GCACAGCCAC GACCAACAGC ATAGACAACA CGGGCGATGT GGCCACGACC
AGCCTGACCG CAACCGGAAC GGTAGCGGCC GGAACGCTTG ACGTGACCGG TGACGCCGAT
GTGGGCGGTG CCCTGACCGT TACCGGCACA GCCACGACCA ACGGCATAGA CAACACGGGC
GATGTGGCCA CGACCAGCCT GACCGCGACC GGAACGGTAG ACGCTGCTGA CATGACCACC
GGATCTCTGA CGGCCAGCGG AACGGTAGGT GCCGGCAGCC TGGACGTAAC CAATGATGCC
GATGTGGGTG GTGCTCTGAC CGTTACCGGC ACAGCCACGG TGAATAATGA CATGGTCGTG
ACCGGCCTTG CCGATCTCCA GGGTGATGCC GATGTGGCTG GCACCCTGGA TGTGGAGGGC
GCCCTGACCG CCACCGGCAC CACCAATACC ATTGGTACTG TCGGCACGTC GATCAACACC
ATCACCGGCG CAAGCAGCAC CATGATTGGT GATAATGCCG GTGTAAGTCT TACCACCGAC
AGCGCGAGTA TGGCCGTGAT CACTGGTCCG GGCGCTGGCA CGGCCGTGAG AGCCACGGAC
ACTGATATCA GAATGGGTGT GGCCGATGGC TTGGGAGGCA GCGCAGGTGT GGTTGCCGAA
GTTGACAACG TCATTATGTC CGTGAGCGGC GGTGCCTTTA CGATGGTGAC CGACGACAGT
GCGTCTATGG GCGTGATCGG TGGCGGCGGT ATGACCGTCT CTGGTACGGG AGACAGCAGT
TTAGTATCCC TTACCACGGA AGATGGACAT GGCCTGACGG TTGACCAGTC CACCGGCACC
ACCACCCTGA CCGGCGGTGC CAACTCAACC TCCTGGACAC TGGATGACGG CGGCGCGGTC
CTCAATGACA GCGTCAACGG CGATACGTTT ACCGTTGATA ACGCGGGCAA TACGTGGATT
GCCGGCGACG CTGATGTGGA CGGGAGCCTG ACGGTTGACG GAACGACCAC GCTCAATGAT
GACCTGATCG TGGCTGGCGA CTCCGACCTG AACGGCGCTC TGTCCGTGGC CGGTACTGCC
ACAATGGAGA GTGACCTGGT AGTGAACGGT GACAGCCAGA TGGACGGCAG CCTGACGGTT
GACGGCACGA CCACGCTGAA CGATGACCTG ATCGTGGCCG GTGACTCCGA CCTGAACGGC
GCCCTGTCTG TTGCCGGGAC CGCTACAATG GAGAGTGACC TGGTAGTGAA CGGTGACAGC
CAGATGGACG GCAGCCTGAC GGTTGACGGC ACGACCACGC TGAACGACGA TCTGATCGTG
GCTGGCGACT CCGACCTGAA CGGCGCCCTG TCTGTTGCCG GGACCGCTAC AATGGAGAGT
GACCTGGTAG TGAACGGTGA CAGCCAGATG GACGGCAGCC TGACGGTTGA CGGAACGACC
ACGCTCAATG ATGACCTGAT CGTGGCTGGC GACTCCGACC TGAACGGCGC TCTGTCCGTG
GCCGGTACTG CCACAATGGA GAGTGACCTG GTAGTGAACG GTGACAGCCA GATGGACGGC
AGCCTGACGG TTGACGGCAC GACCACGCTG AACGATGACC TGATCGTGGC TGGCGACTCC
GACCTGAACG GCGCCCTGTC CGTGGCCGGT ACTGCCACAA TGGAGACCGA CCTGGTTGTG
GACGGTGACT CCACTATGCA CGGCACCCTG GATGTGGAGG GTGCTCTGAC CGCTACCGGC
ACCACCAACA CCATTGGTAC CGCCGGTGTG TCGGACAACA CCATTACCGG TGACACCAAC
ACCATGACCG GTGCCACAAG CAGCACGGTG ACCGGTGATA ACGCCGTCGT GGACCTGACC
ACCGACACGG CCAACCTGTA CGTGGATAAT GGTTCAGGGG CTTATGCCGG TGTAATGACA
ACAGCCGGTA CGGTTGCCAT GGGCGTGACA GATGGGGCAG GTGCCGGTGC AGGCGTTATT
GCCGAGATCG ATGAAGTGTC CATGGCAGTG ATGGGCGGCG GTAACATGAC GGTCAGCGGA
ACGGGCGTCA ACAGCTATGT TGAAGCGATT ACAGCTGACG GCGATGGCCT GACAGTTGAC
CAGGCCGGTG ATACCACGAC CCTGACCAGC AGCAACGCCA ATGTGGAACT GACCACGGAC
AGCGCAGCCA TTGGCGTGGA CGGTGTGTCA GGTCTGGTTG CCACGGATAC CGACGTTACC
ATGAGTATGA CCGGCGGCGC GAGCATGACG GTGACCGACA CCAGCACTAC CATTACGGCG
TCGGGTACCA ACACTATCAC AGGCGATGAG AATACTATCA CCGGCGCAAC TAGCAGTACG
ATGTCCGGCG ACAACGCCAT CGTGGATCTG TCCGCCGACA CCGCGAACCT TTATGTGGAC
AATGGTTCCG GGGCTTATGC CGGTGTGATG ACCACGGCCG GTACGGTTGC CATGGGCGTG
ATGGATGGCG CAGGCGCCGG TGCAGGCGTT ATTGCCGATA TCGATGAGGT GTCCATGACG
GTGATGGGCG GCGGTAACAT GACAGTCAGC GGCACGGGCG CCAACAGCTT CGTTGAAGCA
ATTACAGCTG ATGGCGATGG CCTGACAGTT GACCAGGCCG GTGATACCAC GACCCTGACC
AGCAGCAACG CCAATGTGGA ACTGACCACT GACAGCGCGA TGGTGGGTGT GACCGGCGGC
GGCAGCATGA CTGCCACCGG CACGGGTGAC ACCAGCCAGG TGACCCTGCT GACGGCCGAC
GGCCATGGCC TGACGGTTGA CCAGGCATCC CACACCACAA CGCTGAACGG CGGTTCCAAC
TCCTCCTCGC TGACCCTGGA GGATGCCGCC GCGACACTGG CGGTGGGCAC CGATACAACC
GCTGAAATCC AGGTGCTCGA GGCCACCAAC GATGGCACGA CAACTGCCGT TACCATCGGC
GGTGTTGACA ACGTGTCCAA CGACATTCTG GCAACCGCCA GCGGCGGCAT CAACAACCTG
ACAGCCAATG CCGTGGACGG CACGAACAAC ATTGAGGCGG CTACCAACAA CATCGGTGCT
GCCACGGCCA ACTCGGTGAA CGTTATTGGT AACGCCGGCA CATCGGCCAA CACCATCACC
GGTGCCACCA ACACCATTGT GGGCGTGACC ACGGTCACCT CCACCGGTAC GGCCAACCAG
ATGATCGTGG ATGCCACAAG CTCCCGGCTT GTCAGTGCCG ACGGCACCCA GAGCGCGGCG
GTGAGCAACA ACGGCATTTT CATCGATTCG GTGGGGCCCA ACGACGCCCA GGCCGGCCTT
GAGGTGACGC CTACCCAAGC CAGCCTGTAT GTGAACTCGG CAAGTGGCGC GCCCCATGGC
ATTCTGATCA GCCAGACCAG TACGGTGATT GCCGGCGGAA CCGGTTCCAC CTCGCTGACC
CTGAATGACG ACGGTGCCAC CTTTGCCGAA GTGGGCACCG GTGAGCCTGT TATCGTGACC
GGTGTGGCTG AAGGTGAGGA TGACTTTGAC GCGGTCAACT TCGTGCAGTT CAGGCGTGAA
ATTGACCGGC TGGACAAGCG GATGGATGAG TTTGCCGGCG GTGTGGCATC AGTTGCCGCC
CTGGCGGCCA TTCCCGGCCC CGTCAATGGT AAATGCTTTT CCGTTGGCGC CGGGTTTGGC
CATTATGATG GTGAGGATGC TATCGCCATC GGCGGTAAGG CCTGCGTGTT CAGCAAGAAC
ATCGTGGTCA CCGGCGGCGC CGGCTTCAGC AACAGCCAGA CCACCATCAA CGCGGGTATC
GGTTTCAGTT TTTAG
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| Protein sequence | MKKWQRFFNL PAMLLLAVLV VNGMSGAAWA ADLGVLLDGS VVSGTLSVDD TTNAVTVGGS
LTASGTVSAG SLSVTGTVAA GTLDVTGDAD VGGALTVTGT ATTNGIDNTG DVATTSLTAT
GTVAAGTLDV TGDADVGGAL TVTGTATTNG IDNTGDVATT SLTATGTVAA GTLDVTGDAD
VGGALTVTGT ATTNSIDNTG DVATTSLTAT GTVAAGTLDV TGDADVGGAL TVTGTATTNG
IDNTGDVATT SLTATGTVAA GTLDVTGDAD VGGALTVTGT ATTNGIDNTG DVATTSLTAT
GTVAAGTLDV TGDADVGGAL TVTGTATTNS IDNTGDVATT SLTATGTVAA GTLDVTGDAD
VGGALTVTGT ATTNGIDNTG DVATTSLTAT GTVDAADMTT GSLTASGTVG AGSLDVTNDA
DVGGALTVTG TATVNNDMVV TGLADLQGDA DVAGTLDVEG ALTATGTTNT IGTVGTSINT
ITGASSTMIG DNAGVSLTTD SASMAVITGP GAGTAVRATD TDIRMGVADG LGGSAGVVAE
VDNVIMSVSG GAFTMVTDDS ASMGVIGGGG MTVSGTGDSS LVSLTTEDGH GLTVDQSTGT
TTLTGGANST SWTLDDGGAV LNDSVNGDTF TVDNAGNTWI AGDADVDGSL TVDGTTTLND
DLIVAGDSDL NGALSVAGTA TMESDLVVNG DSQMDGSLTV DGTTTLNDDL IVAGDSDLNG
ALSVAGTATM ESDLVVNGDS QMDGSLTVDG TTTLNDDLIV AGDSDLNGAL SVAGTATMES
DLVVNGDSQM DGSLTVDGTT TLNDDLIVAG DSDLNGALSV AGTATMESDL VVNGDSQMDG
SLTVDGTTTL NDDLIVAGDS DLNGALSVAG TATMETDLVV DGDSTMHGTL DVEGALTATG
TTNTIGTAGV SDNTITGDTN TMTGATSSTV TGDNAVVDLT TDTANLYVDN GSGAYAGVMT
TAGTVAMGVT DGAGAGAGVI AEIDEVSMAV MGGGNMTVSG TGVNSYVEAI TADGDGLTVD
QAGDTTTLTS SNANVELTTD SAAIGVDGVS GLVATDTDVT MSMTGGASMT VTDTSTTITA
SGTNTITGDE NTITGATSST MSGDNAIVDL SADTANLYVD NGSGAYAGVM TTAGTVAMGV
MDGAGAGAGV IADIDEVSMT VMGGGNMTVS GTGANSFVEA ITADGDGLTV DQAGDTTTLT
SSNANVELTT DSAMVGVTGG GSMTATGTGD TSQVTLLTAD GHGLTVDQAS HTTTLNGGSN
SSSLTLEDAA ATLAVGTDTT AEIQVLEATN DGTTTAVTIG GVDNVSNDIL ATASGGINNL
TANAVDGTNN IEAATNNIGA ATANSVNVIG NAGTSANTIT GATNTIVGVT TVTSTGTANQ
MIVDATSSRL VSADGTQSAA VSNNGIFIDS VGPNDAQAGL EVTPTQASLY VNSASGAPHG
ILISQTSTVI AGGTGSTSLT LNDDGATFAE VGTGEPVIVT GVAEGEDDFD AVNFVQFRRE
IDRLDKRMDE FAGGVASVAA LAAIPGPVNG KCFSVGAGFG HYDGEDAIAI GGKACVFSKN
IVVTGGAGFS NSQTTINAGI GFSF
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