| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2275 |
|---|
| Symbol | |
|---|
| ID | 5695123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 2754054 |
|---|
| End bp | 2755688 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641264881 |
|---|
| Product | ferredoxin-dependent glutamate synthase |
|---|
| Protein accession | YP_001530156 |
|---|
| Protein GI | 158522286 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0069] Glutamate synthase domain 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCAA ACGGAAGCAT TAGCCCTTCA ACACTAAGCC TCAAGGACCT GCCCTGGCAG
ATCCTGTGGG ACAAAGAAAA ATGCACGCTC TGCGGCCGGT GCACGTCGGT ATGCCCGGTG
CGCACCCTTG AACTGGGCGT GTTCAGAAAA CGGGTGGTCA AACCCAACAT TCATATCAGC
CACGCCTCTT CCAGCAGCTT CGAGGTGTAT TACGGCATTC GGCAGCAGAC CGCGCCCGCC
AACGCCTGCG TGGGATGCGC CATGTGCACC CTGGTCTGCC CCAATGACGC CATTCTGCCG
GTTCGCGGCG ACGAGGCCGA CAAGCTGATG TTCCACGTCA ACCAGGGCGG CACGCCCCGG
CAGCGGGGCG GACGCAGAAA CGCGCCGGGC GGTATTTTAG ACCGGATCAA GTTCATTCGT
ATCTCCATGC TCACCGACCC GGCCCTGGAT GCCGGCCGTC ACGAATTCGA GCTGCGGACC
CTGCTGGGGC GGGTGCTACC GCCGGAGGAG AACCTTGCCC ACCTGCGGGA AAACGGATGG
ATTCCCCCGG TGCGGGAGAT CTATCCCCTG ATCATCGGCG GCATGTCCTT TGGCGCCCTC
TCCCCCAACA TGTGGGAGGG GCTCCAGATG GGCGTGGCCT ACCTCAACGA AGAGATAAAC
ATGCCGGTAC GCATGTGCAC TGGTGAGGGC GGCTGCCCGC CCCGGCTCCT GCGCAGCCGT
TTCCTGCAAT ATGTGATTTT GCAGATTGCC AGCGGCTACT TTGGATGGGA CGAAATCGTC
CACGCCATTC CGGAAATGAA GGTGGACCCC TGCGCCATTG AGATCAAGTA CGGCCAGGGC
GCCAAGCCGG GGGACGGGGG CCTGTTGATG TGGTATAAGG TCAATAAATT AATCGCCGCC
ATTCGGGGGG TTCCCGAGGG TATCAGCCTG CCCAGCCCGC CCACTCACCA GACCAAGTAC
TCCATTGAGG AGGCCGTGGC CAAGATGATC CAGTCCATGT ACATGGCCTG GGGATTCCGC
GTACCGGTCT ATCCCAAGAT ATCGGCCACC TCCACGGCCC TGGCCGTGCT CAACAACCTG
TCCCGCAATC CCTATGCCGC CGGGCTGGCC ATTGACGGCG AAGACGGCGG CACCGGCGCG
GCCTATAACG TATCCATGAA CAGCATGGGC CACCCCATTG CCAGTAACAT TCGGGACTGC
TACCTCAACC TGGTCAAACT GGGCAAGCAG AATGAGATTC CCCTGCTGGC CGGCGGCGGG
GTGGGCAAGT CCGGCAACCT GGCCGCCAAT GCAGCGGCCC TGATCATGCT GGGCGCCAGC
GGCGTGCAGG CGGGCAAATA CGTGATGCAG GCCGCGGCCG GGTGCCTGGG GTCGGAGACA
GACCGGTGCA ACATCTGCAA CATCGGCCAG TGTCCCAAAG GCATCACCTC CCAGGATCCG
AGGCTTTACC GGCGGCTGGA CCCCGAAGAC GTTGCCCAGC GGATCGTGGA CATGTTTTTA
AGCTTTGATA CGGAACTGAA AAAAATTGTC GCGCCCCTGG GCCGCTCCAC GTCCCTGCCC
ATCGGCATGG CCGATGCCCT GGGCATCGAC GATATCGCGG CCGCGGAACG GCTGCGGATC
AAGTACGTGG TATAA
|
|---|
| Protein sequence | MSANGSISPS TLSLKDLPWQ ILWDKEKCTL CGRCTSVCPV RTLELGVFRK RVVKPNIHIS
HASSSSFEVY YGIRQQTAPA NACVGCAMCT LVCPNDAILP VRGDEADKLM FHVNQGGTPR
QRGGRRNAPG GILDRIKFIR ISMLTDPALD AGRHEFELRT LLGRVLPPEE NLAHLRENGW
IPPVREIYPL IIGGMSFGAL SPNMWEGLQM GVAYLNEEIN MPVRMCTGEG GCPPRLLRSR
FLQYVILQIA SGYFGWDEIV HAIPEMKVDP CAIEIKYGQG AKPGDGGLLM WYKVNKLIAA
IRGVPEGISL PSPPTHQTKY SIEEAVAKMI QSMYMAWGFR VPVYPKISAT STALAVLNNL
SRNPYAAGLA IDGEDGGTGA AYNVSMNSMG HPIASNIRDC YLNLVKLGKQ NEIPLLAGGG
VGKSGNLAAN AAALIMLGAS GVQAGKYVMQ AAAGCLGSET DRCNICNIGQ CPKGITSQDP
RLYRRLDPED VAQRIVDMFL SFDTELKKIV APLGRSTSLP IGMADALGID DIAAAERLRI
KYVV
|
|---|
| |