Gene Dole_2254 details

Gene Information

• Locus tag: Dole_2254
• ID: 5695102
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 2730882
• End bp: 2731559
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641264860
• Product: hmc operon protein 5
• Protein accession: YP_001530135
• Protein GI: 158522265

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGATT TTGTCACAGG CCCCCTGCTC TGGCTCACCT TCATCATCTT TGTCGTCGGC 
CTTCTTGTCC GGCTGGTGGT CTATATCCGC GGACTTGACT GGAAGGCGGA CCGCGTCACC 
TACCGGGTCA ACACGTCATA CGGGATAAAG GGGGCGCTGC GCTCGATCAT TTCCTGGCTG 
ATCCCCTACA AAACCTTTGG CTGGCGGACC AACCCGGTGA TGACGGTTCT TTTTTTCATC 
ATGCATGTCG GCCTGCTGGT GACGCCGGTC TTTCTGAAGG CCCACAATTA CATGCTGTAC 
GATGCGTTCG GTTTCTCCCT GCCCACCATT CCGGACGGGG TGGCCGATCT CCTGACCATC 
GGCGTGATAA CGGCTGTGGC CTTTATCCTG CTGCGCCGGC TTGCGCTGCC CGAGGTCCGC 
ATTCTCACCG ACTGGAAAGA CATCGTGCTG CTGGGGATCA CGGCGGCTCC CTTTGTCACC 
GGTTTTCTGG CCTACCACGA GGCGGGCAAC TACGATTTCT GGATCATCGC CCATATATTA 
AGCGGCGAGA TCATGCTGAT AGCCGTTCCC TTTACCAAGC TTTCCCACTT CCTGCTCTTT 
TTCCTGTCCC GGGCACAGCT TGGCATGGAT TTCGGCATTA AGCGCGGCGG AATGAAAGGC 
AAAGGGTTCG CCTGGTAG 

 

Protein sequence

MYDFVTGPLL WLTFIIFVVG LLVRLVVYIR GLDWKADRVT YRVNTSYGIK GALRSIISWL 
IPYKTFGWRT NPVMTVLFFI MHVGLLVTPV FLKAHNYMLY DAFGFSLPTI PDGVADLLTI 
GVITAVAFIL LRRLALPEVR ILTDWKDIVL LGITAAPFVT GFLAYHEAGN YDFWIIAHIL 
SGEIMLIAVP FTKLSHFLLF FLSRAQLGMD FGIKRGGMKG KGFAW