| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2140 |
|---|
| Symbol | |
|---|
| ID | 5694983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 2598580 |
|---|
| End bp | 2600394 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641264741 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001530021 |
|---|
| Protein GI | 158522151 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGA GCATGAATCC AGCCATGACA GACACTTATT ATATTGTATA CAACCCCATC
GCCTACGACC TGATGGCCAT GGTCAACGAG TCCTCGCTCA CCATGGCATC GGTCATATCC
CACCTGACGC GCCAGGATGC GGCCGCGCTC AATGAAGAGA CCTACCTGCG ATTTTTGCGA
TTTGATCCGG GAAAGGTACG GGTGGGCATC AACGACTTTT ACGGCATTGA CAACTATGCC
ACCTATTATA TCGCCAACCA GGTGGCCCGT TTTGATCCGT CGGCCTCCAT CTTTATTGCC
GACGGCAAGC GGGAGACCAT CGACGGCCTT ATCGTGCGGC AGGGCCGCAA GCCCCGGGCC
GTGTTCATCA CATCGATCAG CGCCAACTTC CCAACGGCGG CTTTGTCCGC CATTGCCTTG
AACCACGGCA GAATTCCAGT GATCTTCGGC GGTATTCATG TCTCCTGCTC GCCGAATGAC
GTGGAGCTGC TGGTGCGTCA AAACGCGCCC CACCCGGAGC TGATCGCCAA TGCCAGGGGG
CCGGGAGACA CCCATGTGTT TGCCGAAGTC ATGACCGACC TGGCCGCGGG CACTTTGAAA
AAGGAGTATA CCGGCTCAGT CACCCTGGAA GACGGTGTCT GGGGCCGGGA GAACATCGCT
ACCCTGCCCG GCATTGAGCC GCCCTATCTT AAAAAACTGC CCGTGATCGG CAACTATTTA
AGCCGTATCA CCCGCGGCAA TGTGGCGGCT CCCTACCTGG GATGCCCCTA CTCGTGCAGT
TTCTGCTCCA TATCGGCCCT GCCGAAAAAC CAGCGCCGGT TCATGTCCCG AACGCCCAAG
GATTTTGTGG ACGAAATCGC CGAGACACAA AAAAACGGCG CCACCTTTAA AAACCGGTTT
TACGTGTTTC TGCCGGACAA CCTGCTGATC AGCGGAAAAA AGCTCGAGGC GTTTTTAGAC
GAAATCATCG CCCGCAAGGT CAAAATCAAC TATATCTCCC AGATATCCAT TGAAATCGCG
GACAGCCCCC ATTTACTGGA AAAGCTGCGG CGCTCCGGGG CTTCCCACTT TTTCATCGGG
TTTGAATCGT TAAACCTGGA CAACCTGAAG TCCATCGGCA AGGCGGCGGT CCGTGAAATT
GAAAAGAGCG GGCTGAGCGT GGCCGACTAC TATGCCCGGC AGATCAGAAA GATCCAGGAT
CACGGCATCT CCATTCACGG CGCGTTTATC ACCGGCATGC CCCACGACTA TTTTAATGAT
CTTTCCGACC ATTCGGGTAT TGCCATCGCC GATTTCTGTA TCGAAAACCA CATCACCATT
CAGGCAACGG TGTTGAACGA CCTGCCCGGT TCCCGGAACT TCCAGGAGAG CCAGGAGGGC
GGCACCTACC TTTACGGCAG GCAGGGAACG GTCCCCTATT TTTGCGCCCT GTCCACATCA
GACCTGATGG AGTCCAACCG GGCCATTCCC GGCTCCCTTA AAAACAGCCC CCTGGTCACC
TTCTACATGA CCTACGACAT GGTGGAACGG GTCTGTGCAA GAAAGACCGC CCTCAAGACA
TCCCTCTTTT CAGGGAAAAA GGCGTGGCAG CACCCCACGG CCAAGGGCAG GAAAAACCTT
GTGGAACGGT ACTACGACTG CATGGGGTCC ATCGGATCAC AGCTCGGGGT CAGTTCTCAC
AAGGAGCATA TCGAGGCCAT TGCCTATTCC GACAGAAAAA AAGGATACGT AGGGTGTTTT
GAACGGCTCT ACAACATGGA AAAAAATCCC GGGGTACGAA AGATCTTTGC GGACTACGTC
AAACAGTTCG TTTAG
|
|---|
| Protein sequence | MDWSMNPAMT DTYYIVYNPI AYDLMAMVNE SSLTMASVIS HLTRQDAAAL NEETYLRFLR
FDPGKVRVGI NDFYGIDNYA TYYIANQVAR FDPSASIFIA DGKRETIDGL IVRQGRKPRA
VFITSISANF PTAALSAIAL NHGRIPVIFG GIHVSCSPND VELLVRQNAP HPELIANARG
PGDTHVFAEV MTDLAAGTLK KEYTGSVTLE DGVWGRENIA TLPGIEPPYL KKLPVIGNYL
SRITRGNVAA PYLGCPYSCS FCSISALPKN QRRFMSRTPK DFVDEIAETQ KNGATFKNRF
YVFLPDNLLI SGKKLEAFLD EIIARKVKIN YISQISIEIA DSPHLLEKLR RSGASHFFIG
FESLNLDNLK SIGKAAVREI EKSGLSVADY YARQIRKIQD HGISIHGAFI TGMPHDYFND
LSDHSGIAIA DFCIENHITI QATVLNDLPG SRNFQESQEG GTYLYGRQGT VPYFCALSTS
DLMESNRAIP GSLKNSPLVT FYMTYDMVER VCARKTALKT SLFSGKKAWQ HPTAKGRKNL
VERYYDCMGS IGSQLGVSSH KEHIEAIAYS DRKKGYVGCF ERLYNMEKNP GVRKIFADYV
KQFV
|
|---|
| |