Gene Dole_2128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2128 
Symbol 
ID5694971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2584314 
End bp2585639 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content60% 
IMG OID641264729 
Producthypothetical protein 
Protein accessionYP_001530009 
Protein GI158522139 
COG category[S] Function unknown 
COG ID[COG2006] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCGA TTCTGAGCTA CAGGGACCAT TCGACCACAA GCCGGGCCAT TGACCTGTGC 
GCCGGTTTTG AGCACTTAAA ATCCGGAGAC CGGATCATTA TCAAGCCCAA TGCCGTGGGG
GCCGATCCCG GCATGCCGTA TTACGGCATG ATGACCACGG CCACCGTGGT GGAAGGCATT
GTCCGCGCTC TGCTGGACTT CGGGTGCCGG CCGGAAAATA TCACCATCGG CGACGGCGGC
GCTGTCCGCA GGGAGCTGGG ATTGAATACC CGCATCATAT TGACAGCCAT GGGCATGCGG
CACATCGCCC GAACCCATGG TGTTAAAATG ATCGACTTTA ATGAAGCTCC CATGAAGACG
GTGGAATGCG GCACCCTGCA ACTGGGAATC GCCCGGCCGG TGCTGGAGGC CGATTTCCTG
ATCAATGTAC CGGTGCCCAA ATACCACGAC CAGACCGGCG TCACCCTCTC TTTGAAGAAC
CTCAAGGGGT GCCTGGCCCC GGCTGCCAAG CGCAGCTGTC ACACGGCCCG GCTGGAGGAC
CATATCGCCG CTTTTAACAC AAAGATCCCC TGCCACCTCA CGGTCATGGA CGGAATCTAT
TTTCTGCGGG GAGGCGGCCC CATGATCGAC TCCGGCGAAC CCTGCCGGAA GAACATGATC
ATGGCCGGCA CCGACCGTAT CGAAATGGAT TCAGCCGCCG CCTGGATTCT GGGGGTCGAT
CCCAAAACCG TGCGGCACCT GACAACGTAT GCCCGGCTTA TGGACAGGGA GGGCGACGTG
GGCCGGGTGA CGTGGGCCGG GGAAGACCCG GAGCCGTTTC GGGAACCCTC CTTTGACGGG
GAGATGGAGG TGTTCGGTCA CAATTTCCAG CGGGCCGGCA TTCGCGGCAT TCGCATTCTG
CCGCCGGGCC AGACCTGGTG CACGGGCTGC AACATCAGCC TGCGGGCCGC CCTGTACATG
CTTTGCAAGG ACAATCCGGG TCACGATTTC GGTGATGTGG AGATTGTCTG CGGCAAGCAG
GCCCGGGCCG CCGGCGATGC CGCCCGCACC ATCCTGTTCG GTGACTGTCC CGTAAAAACC
CATGCCAGAA ACACGAAAAC GCGGGAGCGC CTGGAACTTT CCGGGTGCCC GCCGTCGTTT
ATAAAAGCCT ATCCGGCCAT GATGCGGTTT CTGCTGCCGC CCCCGAAGGC CGGATGGCAG
GTGGGAAAAA ACCTGACCCT GGGCGGGCTG ACCCATACCG GGCTCTACCG GATGCGGTTT
CCGTTTTTCG ATGAGATGAC CCGCTCAGCC CAGTTCGATC CCACTGATTT TTACCGGAAA
CGATAA
 
Protein sequence
MISILSYRDH STTSRAIDLC AGFEHLKSGD RIIIKPNAVG ADPGMPYYGM MTTATVVEGI 
VRALLDFGCR PENITIGDGG AVRRELGLNT RIILTAMGMR HIARTHGVKM IDFNEAPMKT
VECGTLQLGI ARPVLEADFL INVPVPKYHD QTGVTLSLKN LKGCLAPAAK RSCHTARLED
HIAAFNTKIP CHLTVMDGIY FLRGGGPMID SGEPCRKNMI MAGTDRIEMD SAAAWILGVD
PKTVRHLTTY ARLMDREGDV GRVTWAGEDP EPFREPSFDG EMEVFGHNFQ RAGIRGIRIL
PPGQTWCTGC NISLRAALYM LCKDNPGHDF GDVEIVCGKQ ARAAGDAART ILFGDCPVKT
HARNTKTRER LELSGCPPSF IKAYPAMMRF LLPPPKAGWQ VGKNLTLGGL THTGLYRMRF
PFFDEMTRSA QFDPTDFYRK R