Gene Dole_2123 details

Gene Information

• Locus tag: Dole_2123
• ID: 5694966
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 2578326
• End bp: 2578805
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641264724
• Product: CBS domain-containing protein
• Protein accession: YP_001530004
• Protein GI: 158522134
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3448] CBS-domain-containing membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.00617964
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGATT GCGCAAGAGA CATCATGGTC CGGGACTTTG ATTCCATCAA CGAGAACGCG 
CCGGTGGAGC AGGCCATCAC CAAGATTCTG GAAGGCCGGC TGCGCCCGAC CGGATACAAA 
ACCGTCAGCC TGATGGTGAC CAATGACATG CAGCAGCTGG TAGGGGTGGT CACCCTGTTT 
GACATCCTCT ATCACCTGCG GCCCACCTTT TTAAACTTCG GCATCGACGG CGAGTATGTC 
GCATGGGAAG GCATGCTGGA ACCGGCCGTC CGGGAGCTCA AGGGCAAACA GGTAAAAAAC 
ATCATGAGCC GGGGCGCGGT CACGGCAAGC CCGGATGATC ATGTCATGGC CCTTGTCGAC 
CGCATGGTGA AAAACAAGTA CCGCCGCCTG CCGGTGGTGG ACAACGGCAG GCTGACGGGC 
ATTGTCTACG TGACCGACGT CTTTCACTAC CTTTTCAAAA ACAGAAACGT CAACGGATAG 

 

Protein sequence

MPDCARDIMV RDFDSINENA PVEQAITKIL EGRLRPTGYK TVSLMVTNDM QQLVGVVTLF 
DILYHLRPTF LNFGIDGEYV AWEGMLEPAV RELKGKQVKN IMSRGAVTAS PDDHVMALVD 
RMVKNKYRRL PVVDNGRLTG IVYVTDVFHY LFKNRNVNG