Gene Dole_2094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2094 
Symbol 
ID5694937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2543541 
End bp2544569 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content52% 
IMG OID641264695 
Producthypothetical protein 
Protein accessionYP_001529975 
Protein GI158522105 
COG category[S] Function unknown 
COG ID[COG4804] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAA CGCCTCAACA AGACAGGGAG TATACCTCTT TTATCAAGGA GATAAAAAAG 
CGGATCAATG ATTCCCGGAT AAAGGCGGCG GTCTCCGTCA ACCGGGAATT GCTGACCCTG
TACTGGGACC TGGCCGCCCA GATTGTTAAA AAACAGCAAC AGGCTTCCTG GGGCGACGGC
TTTTTAGACC GGATGAGCAA GGACCTGCAA GCGGAATTTC CCGATATTAA AGGCTTTTCC
CTGCGAAACC TGAAATACAT GCGTCAGTGG TATCTGTTCT GGTCGCAGGA AGCGTCAATT
GGGCAACAGC TTGTTGCCCA AATTCCCTGG GGGCACAACC TGGTCATTGT CAGCAAAACC
GAAAACCCCG AAGAAGCCCT GTTTTACGTC CAGAAAACCA TGGAAAACAA CTGGTCCCGG
GCGGTTCTGA CCCACCAGAT CGAAAGCAAT CTGTTTCAGC GCCAGGGCCG GGCTGTAACC
AATTTTACGG CCACCCTGCC GGCCCCCCAG TCCGACCTGG CCCTGCAAAC CATTAAAGAC
CCCTATAATT TTGATTTTCT CACCCTGCGG GAAAAACATG ATGAAAAGGA GCTGGAAAAT
GCCCTCATGG ACCAGGTCAC CCGCTTTCTG CTGGAGCTGG GCGCCGGGTT CTCTTTTATC
GGCCGCCAGC ACCGGCTGAC GGTGGGCGAC GAGGATTTTT ATATCGATCT GCTTTTTTAT
CATGTCTGCC TGCACTGCTA TGTGGTGGTG GAATTAAAAG CGGTCCGGTT CAAACCGGCC
TTTACCGGCC AGCTCAATTT TTATGTGTCT GCCGTGGACG GCCAGATGAA GACGGAACAG
GACAATCCCA CCATCGGTAT TCTCATCTGC AAGTCAAAAA ACAAGACCGT GGTGGAATAT
GCCTTAAAGG ACATTCACAA GCCCATCGGC GTCAGCGAAT ACATGATCAC CCGCTGCCTG
CCCGATGAAT TCAAGTCCTC CCTGCCGAGC ATCGAAGATA TAGAAGCCGA ACTGGAGGAC
CTTGAATGA
 
Protein sequence
MSKTPQQDRE YTSFIKEIKK RINDSRIKAA VSVNRELLTL YWDLAAQIVK KQQQASWGDG 
FLDRMSKDLQ AEFPDIKGFS LRNLKYMRQW YLFWSQEASI GQQLVAQIPW GHNLVIVSKT
ENPEEALFYV QKTMENNWSR AVLTHQIESN LFQRQGRAVT NFTATLPAPQ SDLALQTIKD
PYNFDFLTLR EKHDEKELEN ALMDQVTRFL LELGAGFSFI GRQHRLTVGD EDFYIDLLFY
HVCLHCYVVV ELKAVRFKPA FTGQLNFYVS AVDGQMKTEQ DNPTIGILIC KSKNKTVVEY
ALKDIHKPIG VSEYMITRCL PDEFKSSLPS IEDIEAELED LE