Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2092 |
Symbol | |
ID | 5694935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2541255 |
End bp | 2541926 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641264693 |
Product | DNA repair protein RadC |
Protein accession | YP_001529973 |
Protein GI | 158522103 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATGG CCATGAAAAA ACTAAAAGAT CTGCCGCCCG CTGACCGGCC CCGGGAAAAG CTCCTTAAAC AGGGGGCCGC GTTTTTGTCC GACCAGGAAC TGCTGGCCAT TCTTCTGAGC AAGGGCACGG CCAAAGACGA CGTGTTTGCC CTTTCCCGGA AAATCATCAA AATTATCGAT GAAAAGGGCG CGGCCCTGAC GGCACAGGAT ATCATGGCGG TGGACGGCAT CGGCATGGCC AAGGCCGCCG CTATCTGCGC GGCCTTTGAA TTCGTGCGGC GGCGCGTCAA ACCCCAGGGC CTGAAAATCA AGTTTCCGGC CGATGTGCTG CCCCTGATTC ACCACTACGC CGACCGCAAG CAGGAACATT TTCTGTGCGT GTCCATAAAC GGCGCCAACG AAGTCATGAG CGTCCGGGTG GTCAGCATCG GCCTGATCAA CAAAACCCAG GTCCATCCCC GGGAAGTATT TGCCGATGTG CTGGCCGAAC GCGCCTCGGC CGTGATCGTG GCCCACAACC ACCCCCACGG CGACCTGGCC CCCAGCCGGG AAGATATCCA GGTGACCCGG CAGCTCAAAG ACGCCGCCCA AACCCTGGGC CTGACCTTTC TGGACCACAT CATTTTTAAC ACCACCGGCT ATTACTCCTT TGCCGAGCAG GAAGAACAAT AA
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Protein sequence | MEMAMKKLKD LPPADRPREK LLKQGAAFLS DQELLAILLS KGTAKDDVFA LSRKIIKIID EKGAALTAQD IMAVDGIGMA KAAAICAAFE FVRRRVKPQG LKIKFPADVL PLIHHYADRK QEHFLCVSIN GANEVMSVRV VSIGLINKTQ VHPREVFADV LAERASAVIV AHNHPHGDLA PSREDIQVTR QLKDAAQTLG LTFLDHIIFN TTGYYSFAEQ EEQ
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