| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2090 |
|---|
| Symbol | |
|---|
| ID | 5694933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2539037 |
|---|
| End bp | 2540209 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641264691 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001529971 |
|---|
| Protein GI | 158522101 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.637771 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTTG AAAGGTATTC TAATGATAAG AGGGTGCAGC TTTTTTATCT TTTAGAAAAG
ATCTGCCAAA AATTGGAGCT GACAGACACC CAATATCAGG ACGCAAAGGG TAAATATAAG
GCTGTGGGAG AATGGCTGGA CGGCGGAGAA GTCCTGCACC CGCACGCTCC GCATATTTTC
CCTCAGGGAT CAATGAGCTT GGGGACGACA GTTCGACCTT TGGGGCGAGA TGAATTTGAT
ATTGATCTTG TTTGTCTGCT GAACCTGTTT TCCAGCCGAT GCTCCCCGGA GGCGGTTAGA
AAGGCAGTAG GAGAGCGGCT TGAGGCAAAC GAGGTATACA AAAAAATGCT AGAACCTCTA
AACAGGGGGT GGCGGCTCAA TTATGCGCAA TCAAGTAAGT TACACTTGGA TATTACTCCG
GCCACAAAAG ATGACGGTAG CCAAAACGGC GGTCTGATGG TCCCCGACAG GAAACTTAGA
GAATGGAAAA ACAGCCACCC TCAAGGGTAC GTAAAATGGT TTGAGGATAT TGCAGCCTTG
ATGCCCACCA TCGAATTTTC GGAGAGAGTC GTGATGGCAA AGGTTGACCC GTTTCCTGAA
CAAGTCCCCT TTAAAAGTAT TTTGAAGCGG TGCGTCCAGA TTTTGAAGAG GCACCGGGAT
CTTTGCTTTA TTAATAACGA CGCTAAAAAC GCTCCAATTT CAATAATACT CACCACTCTG
GCCGCAAAGT CCTATCAGCA TCTCGTTTTG TCAAGAAGGT TTACCAGTGA ACTCGATTTG
TTATTTTCCG TGATTCAGCA TTTACCTGAC TTTATAGAGG AGCGGGTTAT TCAAGGGCAG
AAGATCTATT ATATTCCGAA CGAAACCACC AGCGGTGAAA ATTTCGCAGA AAAATGGAAC
ACGCATCGAG AGAGGGCGGA AGCTTTTTTT TCATGGCATA AAAAGGCGAT ATCCGACTTT
GAAAAATTAG AACAGGTTGA AGGGCTGGAT GGGCTCCAGC GACTTCTTGG CGAAGAGGTC
TTCGGTGAAA GAGACACCTC GGTTGTATTT AATGATTACG TCGATGTAAT TAACGAGCGT
CGAAGAAACC GTACTCTAAG CGTGGCGTCC GGCGTTGGTC TGACTACAGG CATAGGGACG
CCGGTCAGGA GGAATACGTT TTACGGGAAA TGA
|
|---|
| Protein sequence | MVFERYSNDK RVQLFYLLEK ICQKLELTDT QYQDAKGKYK AVGEWLDGGE VLHPHAPHIF
PQGSMSLGTT VRPLGRDEFD IDLVCLLNLF SSRCSPEAVR KAVGERLEAN EVYKKMLEPL
NRGWRLNYAQ SSKLHLDITP ATKDDGSQNG GLMVPDRKLR EWKNSHPQGY VKWFEDIAAL
MPTIEFSERV VMAKVDPFPE QVPFKSILKR CVQILKRHRD LCFINNDAKN APISIILTTL
AAKSYQHLVL SRRFTSELDL LFSVIQHLPD FIEERVIQGQ KIYYIPNETT SGENFAEKWN
THRERAEAFF SWHKKAISDF EKLEQVEGLD GLQRLLGEEV FGERDTSVVF NDYVDVINER
RRNRTLSVAS GVGLTTGIGT PVRRNTFYGK
|
|---|
| |