| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2045 |
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| Symbol | |
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| ID | 5694888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2483895 |
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| End bp | 2486117 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641264646 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_001529926 |
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| Protein GI | 158522056 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.8866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATGA ATGCGGCATA TAGCGACATT GTCGGTAATT TGGCCTTCGG CCAGATGACC
CAGATGCACA TGTTCCGCAA CGGCTCTGGC TGGGATGGGA CAGAGTGGCC ATCAGGTTCC
ACCGGCGATC CAGATATCAC CACATGGACC TATCAGCCGT CCACCGGCCT GCTCACTGCC
AAGACCGATG ATGAGGCCAA ATCCACGGCC TACACCTACA CCGCTGCCAA CCGGCTGGCT
ACCCGCACCT GGGCACGGGA TAACAGCACC CTTGTCACCA CCTATGCCTA TGATCTGAAT
ACCGGGGAAC TCACTGGCAT TGATTATTCT GGCACCACGC CGGATGTGGC CTATGCCTAC
ACCCGGGCCG GGCAGATGTA TACCGTGGAC GATGTTGTGG GCACGCGCAC CTTTGCCTAT
AACAGTGCCC TGCAACCCGT CACAGAAACC ATCGACGGCG CTTCCGGCGG GCTGTACAGC
AAAACCATCA CCCGCACATA CGAGACCTCC GGCGTGGTGG GCCGGCCCAC CGGGTTGAGC
CTTACAGGCT ACAGCGTGGC CTATGGGTAT GAGCCTTCCA CCGGCCGGTT TGCAGGCGTC
ACCTGGAACA CCGGGGCCGG AGAAAAGACG GCCACCTATG CGTATGTGGC CGACTCTGAT
TTTGTCGACA CCCTGACCAT GGAGAATCTG GTCACGGATT TTGTCTATGA GCCGAACCGG
GACCTCAAAA CCCAGGTCAG GCACACGTTT GGTGGGGCCG ATATTGCCCA ATATGATTAT
ACCTACACCG CCCTTGGCCA GCGCAAGACC ATGGACCTGA CCCCGGACCT GCCGGATACC
CTGGTCGAGG CTACCACCAC CTATACGCCC GATAATTTAA ACCAGTACGA TGCCATTGAA
ACTGGCGGCG TAACAGATAA CCCGGTCTAT GATGATGACG GCAACCTTAC CCACCAGCAG
GGCATGGTTT ATACCTGGAA CGCGGAAAAC CGCCTCATCT CCGTGGAACC CAAAACCCCG
GCGGAAGGGG ATAAAAAAGT TGAGTTTGCC TACGACTACA TGGGCCGAAG GGTGAAGAAG
TTCGTCTATA CATTCAGCGC CGGCAGCTAC CAGCTGTCAG CTGCCAGCTT ATTTGTCTAT
GACGGGTGGA ACCTGATCCA GGAACTGGAC GGCGCCGGAG CTGTGACAAA GTCCTATGTG
TGGGGACTTG ACCTCTCCCA ATCCCTGCAA GAGGCTGGCG GCGTGGGCGG CCTGCTTTCC
ATGACCGACG GGGTGAATAC TTACCTCTAC TGCCATGATG CCAACGGCAA TGTGGGGCGC
ATGGTCAATG CAGCGGACGG CACCGTGGCA GCGGCTTATG AATACTCGCC GTTTGGCGGG
CTGATTCATA AGAGCGGGAC TATGGCGGAG GAGAATGTGT TCCGGTTTAG CACAAAATAT
TATGATACCG AGACCGGGCT GTATTACTAC GGATACCGGT ATTATGAGCC GGAGATGGGG
AGGTGGGTGA GTAGGGATCC GATTCAGGAA AATGGTGGCC ATAATCTTTA TGCCTTTGTC
TGGAATAACA GTATAGATTT TATTGATTTG TTGGGCAGAC AAGGACGTTA TAGTGGACCA
GACGGTTATT TGAATCAGTA TTCCAGAGAT TTAAGTGTAA ACGGAGGAAT TCCCAAAGGT
ATCGATAAGC CCAGTTCCAT TTTTTATGGA TTATCAGTAG AAATACCATC AATATCGTCG
TCTGTAAAAA TGTCATATGT AATTGCAAAA GGACCGACGC CTGCTGCCCT TTTTTGGTGG
AAATTGACTG CAAACTGTTC AGGTGAAACT TTCTGTTGTA AAAACCAAAA AACTGGGAAC
ACTGAACAAT GGGGAAAAGT ATCTGTATCC TTGGATCTTT CTGTTGGTGT CGAAGCAAGT
ATGCCAACTT CAGGTTTTAA AGCAGATGGT GGGATAAAGA TATCTGGAAT GTCCACTTGC
CCTGCAGAAG GCGTAGGTGC TAAAGCAACT GTTGTAGGGT ATTTTATTGG TGGCGCAGGT
ATTTATTGGT CGAGCAGTCA GTTACAACTT ACTTTTCCAA TTTATCCAGA ATTTAAAGAG
CCTCAATTTG ATTGGAGTTT GAGTACCAAC GCAGGGAATA ATATCGAATT AATTCTTAAA
GCGGGGGTAA AGGGAAGCCT GGAAGTCTAT GGGCCTGTTG GTAATATGTA TAAAGTTATT
TAA
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| Protein sequence | MQMNAAYSDI VGNLAFGQMT QMHMFRNGSG WDGTEWPSGS TGDPDITTWT YQPSTGLLTA
KTDDEAKSTA YTYTAANRLA TRTWARDNST LVTTYAYDLN TGELTGIDYS GTTPDVAYAY
TRAGQMYTVD DVVGTRTFAY NSALQPVTET IDGASGGLYS KTITRTYETS GVVGRPTGLS
LTGYSVAYGY EPSTGRFAGV TWNTGAGEKT ATYAYVADSD FVDTLTMENL VTDFVYEPNR
DLKTQVRHTF GGADIAQYDY TYTALGQRKT MDLTPDLPDT LVEATTTYTP DNLNQYDAIE
TGGVTDNPVY DDDGNLTHQQ GMVYTWNAEN RLISVEPKTP AEGDKKVEFA YDYMGRRVKK
FVYTFSAGSY QLSAASLFVY DGWNLIQELD GAGAVTKSYV WGLDLSQSLQ EAGGVGGLLS
MTDGVNTYLY CHDANGNVGR MVNAADGTVA AAYEYSPFGG LIHKSGTMAE ENVFRFSTKY
YDTETGLYYY GYRYYEPEMG RWVSRDPIQE NGGHNLYAFV WNNSIDFIDL LGRQGRYSGP
DGYLNQYSRD LSVNGGIPKG IDKPSSIFYG LSVEIPSISS SVKMSYVIAK GPTPAALFWW
KLTANCSGET FCCKNQKTGN TEQWGKVSVS LDLSVGVEAS MPTSGFKADG GIKISGMSTC
PAEGVGAKAT VVGYFIGGAG IYWSSSQLQL TFPIYPEFKE PQFDWSLSTN AGNNIELILK
AGVKGSLEVY GPVGNMYKVI
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